API for polyqtlR
QTL Analysis in Autopolyploid Bi-Parental F1 Populations
| Global functions | |
|---|---|
| BLUE | Man page Source code |
| BLUEs.pheno | Man page |
| GIC_4x | Man page |
| IBD_4x | Man page |
| NettletonDoerge | Source code |
| Nstates.fun | Source code |
| Nstates.onepar | Source code |
| PVE | Man page Source code |
| Phenotypes_4x | Man page |
| QTLscan | Man page Source code |
| Rec_Data_4x | Man page |
| SNP_dosages.4x | Man page |
| TM.biv.2 | Source code |
| TM.biv.4 | Source code |
| TM.biv.6 | Source code |
| TM.hex | Source code |
| TM.quad | Source code |
| TMfun.3x_BB | Source code |
| TMfun.3x_QB | Source code |
| TMfun.4x_BB | Source code |
| TMfun.4x_BQ | Source code |
| TMfun.4x_QB | Source code |
| TMfun.4x_QQ | Source code |
| TMfun.6x_BB | Source code |
| TMfun.6x_BH | Source code |
| TMfun.6x_HB | Source code |
| TMfun.6x_HH | Source code |
| bivTM | Source code |
| bx | Source code |
| check_cofactors | Man page Source code |
| colour.bar | Source code |
| convert_mappoly_to_phased.maplist | Man page Source code |
| count_recombinations | Man page Source code |
| estimate_GIC | Man page Source code |
| estimate_IBD | Man page Source code |
| exploreQTL | Man page Source code |
| fast_IBD | Source code |
| fast_permute | Source code |
| findPeak | Man page Source code |
| findQTLpeaks | Source code |
| findSupport | Man page Source code |
| fx | Source code |
| hexTM | Source code |
| import_IBD | Man page Source code |
| impute_dosages | Man page Source code |
| list.depth | Source code |
| mapseq | Source code |
| maxL_IBD | Man page Source code |
| meiosis_report | Man page Source code |
| mr.ls | Man page |
| phased_maplist.4x | Man page |
| plotLinearQTL | Man page |
| plotLinearQTL_list | Man page |
| plotQTL | Man page Source code |
| plotQTL.genome_linear | Source code |
| plotQTL.genome_linear_list | Source code |
| plotQTL.single_LG | Source code |
| plotRecLS | Man page Source code |
| polyqtlR | Man page |
| polyqtlR-package | Man page |
| probgeno_df_to_array | Source code |
| qtl_LODs.4x | Man page |
| quadTM | Source code |
| segList_2x | Man page |
| segList_3x | Man page |
| segList_3x_24 | Man page |
| segList_4x | Man page |
| segList_6x | Man page |
| segMaker | Man page Source code |
| singleMarkerRegression | Man page Source code |
| spline_IBD | Man page Source code |
| state_fun | Source code |
| test_IBD_list | Source code |
| test_dosage_matrix | Source code |
| test_probgeno_df | Source code |
| thinmap | Man page Source code |
| visualiseGIC | Man page Source code |
| visualiseHaplo | Man page Source code |
| visualisePairing | Man page Source code |
| visualiseQTLeffects | Man page |
| weighted.var | Source code |
| write.logheader | Source code |
