View source: R/polyqtlR_functions.R
BLUE | R Documentation |
nlme
packageCalculation of BLUEs from data frame of genotype names and phenotypes (assuming repeated measurements)
BLUE(data, model, random, genotype.ID)
data |
Data frame of genotype codes and corresponding phenotypes |
model |
The model specification of fixed terms, eg. Yield ~ Clones |
random |
The random component of the model (repeat structure, can be nested), eg. ~1 | Blocks if only Blocks are used |
genotype.ID |
The colname used to describe genotypes, e.g. "Clones" |
A data-frame with columns "geno" for the genotype names, and "blue" for the BLUEs.
data("Phenotypes_4x")
blue <- BLUE(data = Phenotypes_4x,model = pheno~geno,random = ~1|year,genotype.ID = "geno")
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