associate_dyes: Associate Dye Names in Batch Import Output

In pooledpeaks: Genetic Analysis of Pooled Samples

Associate Dye Names in Batch Import Output

Description

This function associates dye info with fragman channel names. It was designed to be performed on any fsa formats after final columns are correctly imported.

Usage

associate_dyes(x, y)

Arguments

x	The Output list of data frames from fsa_batch_imp.
y	The path to the folder from the current directory where the .fsa files that will be analyzed are stored.

Value

The input dataframe with an added column assigning fluorescent dye colors.

Examples

y <- system.file("extdata", package = "pooledpeaks")
x <- fsa_batch_imp(y, channels = 5, fourier = FALSE, saturated = FALSE ,
lets.pullup = FALSE, plotting = FALSE, rawPlot = FALSE,
llength = 3000, ulength = 80000 )
associate_dyes(x,y)

pooledpeaks documentation built on April 3, 2025, 10:53 p.m.