SRM quantification example data
This dataset holds peptide SRM measurements matching to 39 proteins. The data is summarized in three data frames.
Three data frames (
leptoSRMedgespp) containing the required input data for SCAMPI.
data frame with 151 distinct peptides (=151 rows)
data frame with 39 distinct protein sequences (=39 rows)
data frame with 151 edges (=151 rows) between peptides and proteins
Ludwig et al., see references
Ludwig et al. Estimation of absolute protein quantities of unlabeled samples by selected reaction monitoring mass spectrometry (2011) Molecular & Cellular Proteomics