meto.scan: Scans a Protein in Search of MetO Sites

In ptm: Analyses of Protein Post-Translational Modifications

Scans a Protein in Search of MetO Sites

Description

Scans a given protein in search of MetO sites.

Usage

meto.scan(up_id, report = 1)

Arguments

up_id	a character string corresponding to the UniProt ID.
report	it should be a natural number between 1 and 3.

Details

When the 'report' parameter has been set to 1, this function returns a brief report providing the position, the function category and literature references concerning the residues detected as MetO, if any. If we wish to obtain a more detailed report, the option should be: report = 2. Finally, If we want a detailed and printable report (saved in the current directory), we should set report = 3

Value

This function returns a report regarding the MetO sites found, if any, in the protein of interest.

Author(s)

Juan Carlos Aledo

References

Valverde et al. 2019. Bioinformatics 35:4849-4850 (PMID: 31197322)

See Also

meto.search(), meto.list()

Examples

meto.scan('P01009')

ptm documentation built on Aug. 7, 2022, 5:05 p.m.