get.seq: Import a Protein Sequence from a Database
In ptm: Analyses of Protein Post-Translational Modifications
get.seq R Documentation
Import a Protein Sequence from a Database
Description
Imports a protein sequence from a selected database.
Usage
get.seq(id, db = 'uniprot', as.string = TRUE)
Arguments
id
the identifier of the protein of interest.
db
a character string specifying the desired database; it must be one of 'uniprot' or 'metosite'.
as.string
logical, if TRUE the imported sequence will be returned as a character string.
Details
MetOSite uses the same type of protein ID than UniProt.
Value
Returns a protein sequence either as a character vector or a as a character string.
Examples
get.seq('P01009')
ptm documentation built on May 29, 2024, 11:50 a.m.
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| get.seq | R Documentation |
Import a Protein Sequence from a Database
Description
Imports a protein sequence from a selected database.
Usage
get.seq(id, db = 'uniprot', as.string = TRUE)
Arguments
id |
the identifier of the protein of interest. |
db |
a character string specifying the desired database; it must be one of 'uniprot' or 'metosite'. |
as.string |
logical, if TRUE the imported sequence will be returned as a character string. |
Details
MetOSite uses the same type of protein ID than UniProt.
Value
Returns a protein sequence either as a character vector or a as a character string.
Examples
get.seq('P01009')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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