Nothing
.print.ascii.pwrss.logistic <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(" Method : ", x$method, "\n", sep = "")
cat(" Predictor Dist. : ", x$dist, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : Odds Ratio = 1\n")
cat(" H1 (Alt. Claim) : Odds Ratio != 1\n\n")
} else if (x$alt == "one.sided" && x$odds.ratio > 1) {
cat(" H0 (Null Claim) : Odds Ratio <= 1\n")
cat(" H1 (Alt. Claim) : Odds Ratio > 1\n\n")
} else if (x$alt == "one.sided" && x$odds.ratio < 1) {
cat(" H0 (Null Claim) : Odds Ratio >= 1\n")
cat(" H1 (Alt. Claim) : Odds Ratio < 1\n\n")
}
if (verbose == 2) {
cat(line)
cat("Key Parameters \n")
cat(line)
cat(sprintf(" Base Probability = %.*f \n", digits, x$base.prob))
cat(sprintf(" Odds Ratio = %.*f \n", digits, x$odds.ratio))
cat(sprintf(" Var. Corr. Factor = %.*f \n", digits, x$vcf))
cat(sprintf(" Mean of Alt. = %.*f \n", digits, x$mean.alternative))
cat(sprintf(" SD of Alt. = %.*f \n", digits, x$sd.alternative))
cat(sprintf(" Mean of Null = %.*f \n", digits, x$mean.null))
cat(sprintf(" SD of Null = %.*f \n", digits, x$sd.null))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n") {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), " <<\n"))
} else {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" Odds Ratio = [prob/(1-prob)] / [base.prob/(1-base.prob)] \n")
cat(" prob : Base probability when predictor = 0 \n")
cat(" base.prob : Probability when predictor = 1 \n")
cat(" beta1 = log(Odds Ratio) \n")
cat(" beta0 = log[base.prob/(1-base.prob)] \n\n")
}
} # .print.ascii.pwrss.logistic()
.print.ascii.pwrss.poisson <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(" Method : ", x$method, "\n", sep = "")
cat(" Predictor Dist. : ", x$dist, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : Rate Ratio = 1 \n")
cat(" H1 (Alt. Claim) : Rate Ratio != 1 \n\n")
} else if (x$alt == "one.sided" && x$rate.ratio > 1) {
cat(" H0 (Null Claim) : Rate Ratio <= 1 \n")
cat(" H1 (Alt. Claim) : Rate Ratio > 1 \n\n")
} else if (x$alt == "one.sided" && x$rate.ratio < 1) {
cat(" H0 (Null Claim) : Rate Ratio >= 1 \n")
cat(" H1 (Alt. Claim) : Rate Ratio < 1 \n\n")
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Base Rate = %.*f \n", digits, x$base.rate))
cat(sprintf(" Rate Ratio = %.*f \n", digits, x$rate.ratio))
cat(sprintf(" Var. Corr. Factor = %.*f\n", digits, x$vcf))
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" SD of Alt. = %.*f\n", digits, x$sd.alternative))
cat(sprintf(" Mean of Null = %.*f\n", digits, x$mean.null))
cat(sprintf(" SD of Null = %.*f\n", digits, x$sd.null))
cat(sprintf(" Critical Value = %s\n\n",
paste(round(x$z.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n") {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), " <<\n"))
} else {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" Base Rate = exp(beta0) \n")
cat(" Rate Ratio = exp(beta1) \n\n")
}
} # .print.ascii.pwrss.poisson()
.print.ascii.pwrss.regression <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
if (x$margin == 0) {
cat(" H0 (Null Claim) : beta - null.beta = 0 \n")
cat(" H1 (Alt. Claim) : beta - null.beta != 0 \n\n")
} else {
cat(" H0 (Null Claim) : beta - null.beta = margin \n")
cat(" H1 (Alt. Claim) : beta - null.beta != margin \n\n")
}
} else if (x$alt == "one.sided" && x$ncp.alternative > x$ncp.null) {
if (x$margin == 0) {
cat(" H0 (Null Claim) : beta - null.beta <= 0 \n")
cat(" H1 (Alt. Claim) : beta - null.beta > 0 \n\n")
} else {
cat(" H0 (Null Claim) : beta - null.beta <= margin \n")
cat(" H1 (Alt. Claim) : beta - null.beta > margin \n\n")
}
} else if (x$alt == "one.sided" && x$ncp.alternative < x$ncp.null) {
if (x$margin == 0) {
cat(" H0 (Null Claim) : beta - null.beta >= 0 \n")
cat(" H1 (Alt. Claim) : beta - null.beta < 0 \n\n")
} else {
cat(" H0 (Null Claim) : beta - null.beta >= margin \n")
cat(" H1 (Alt. Claim) : beta - null.beta < margin \n\n")
}
} else if (x$alt == "two.one.sided" && (x$ncp.alternative > min(x$ncp.null) && x$ncp.alternative < max(x$ncp.null))) {
cat(" H0 (Null Claim) : beta - null.beta <= min(margin) or \n beta - null.beta >= max(margin) \n")
cat(" H1 (Alt. Claim) : beta - null.beta > min(margin) and \n beta - null.beta < max(margin)\n\n")
} else if (x$alt == "two.one.sided" && (x$ncp.alternative < min(x$ncp.null) || x$ncp.alternative > max(x$ncp.null))) {
cat(" H0 (Null Claim) : beta - null.beta >= min(margin) and \n beta - null.beta <= max(margin) \n")
cat(" H1 (Alt. Claim) : beta - null.beta < min(margin) or \n beta - null.beta > max(margin) \n\n")
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Std. Beta Under Alt. = %.*f \n", digits, x$std.beta))
cat(sprintf(" Std. Beta Under Null = %.*f \n", digits, x$std.null.beta))
cat(sprintf(" Std. Margin = %s \n", paste(round(x$std.margin, digits), collapse = " and ")))
cat(sprintf(" Degrees of Freedom = %.*f \n", 0, x$df))
cat(sprintf(" Non-centrality of Alt. = %.*f\n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %s \n", paste(round(x$ncp.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$t.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n") {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), " <<\n"))
} else {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" beta : Regression coefficient under alt. \n")
cat(" null.beta : Regression coefficient under null \n")
cat(" margin : Smallest beta - null.beta difference that matters \n\n")
cat(" Std. Beta Under Alt. = beta * [SD(X) / SD(Y)]\n")
cat(" Std. Beta Under Null = null.beta * [SD(X) / SD(Y)]\n")
cat(" Std. Margin = margin * [SD(X) / SD(Y)] \n\n")
cat(" SD(X) : Standard deviation of the predictor \n")
cat(" SD(Y) : Standard deviation of the outcome \n\n")
}
} # .print.ascii.pwrss.regression()
.print.ascii.pwrss.f.regression <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$k.tested < x$k.total) {
if (x$margin == 0) {
cat(" H0 (Null Claim) : Change in R-squared = 0 \n")
cat(" H1 (Alt. Claim) : Change in R-squared > 0 \n\n")
} else {
cat(" H0 (Null Claim) : 0 <= Change in R-squared <= margin \n")
cat(" H1 (Alt. Claim) : Change in R-squared > margin \n\n")
}
} else {
if (x$margin == 0) {
cat(" H0 (Null Claim) : R-squared = 0 \n")
cat(" H1 (Alt. Claim) : R-squared > 0 \n\n")
} else {
cat(" H0 (Null Claim) : 0 <= R-squared <= margin \n")
cat(" H1 (Alt. Claim) : R-squared > margin \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
if (x$k.tested < x$k.total) {
cat(sprintf(" Change in R-squared = %.*f \n", digits, x$r.squared.change))
} else {
cat(sprintf(" R-squared = %.*f \n", digits, x$r.squared.change))
}
cat(sprintf(" Margin = %.*f \n", digits, x$margin))
cat(sprintf(" Num. Deg. of Freedom = %.*f\n", 0, x$df1))
cat(sprintf(" Denom. Deg. of Freedom = %.*f\n", 0, x$df2))
cat(sprintf(" Non-centrality of Alt. = %.*f \n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %.*f \n", digits, x$ncp.null))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$f.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n") {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), " <<\n"))
} else {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
if (x$k.tested < x$k.total) {
cat(" Margin : Smallest change in R-squared that matters \n\n")
} else {
cat(" Margin : Smallest R-squared that matters \n\n")
}
}
} # .print.ascii.pwrss.f.regression()
.print.ascii.pwrss.med <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
method <- switch(x$method,
`sobel` = "Sobel",
`aroian` = "Aroian",
`goodman` = "Goodman",
`joint` = "Joint",
`monte.carlo` = "Monte Carlo")
cat(x$test, "\n\n", sep = "")
cat(" Method : ", method, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : beta[a*b] = 0 \n")
cat(" H1 (Alt. Claim) : beta[a*b] != 0 \n\n")
} else if (x$alt == "one.sided") {
if (x$std.beta.indirect < 0) {
cat(" H0 (Null Claim) : beta[a*b] >= 0 \n")
cat(" H1 (Alt. Claim) : beta[a*b] < 0 \n\n")
} else {
cat(" H0 (Null Claim) : beta[a*b] <= 0 \n")
cat(" H1 (Alt. Claim) : beta[a*b] > 0 \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Std. beta[a] = %.*f \n", digits, x$std.beta.a))
cat(sprintf(" Std. beta[b] = %.*f \n", digits, x$std.beta.b))
if (x$method %in% c("sobel", "aorian", "goodman")) {
cat(sprintf(" Std. beta[a*b] = %.*f \n", digits, x$std.beta.indirect))
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" Mean of Null. = %s \n", paste(round(x$mean.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
} else {
cat(sprintf(" Std. beta[a*b] = %.*f \n\n", digits, x$std.beta.indirect))
}
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n") {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), " <<\n"))
} else {
cat(paste0(" Sample Size = ", round(x$n, digits = digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" beta[a] : Regression coefficient for path a\n")
cat(" beta[b] : Regression coefficient for path b\n")
cat(" beta[a*b] : Coefficient for the indirect path a*b\n\n")
cat(" Std. beta[a] = beta[a] * [SD(predictor) / SD(mediator)]\n")
cat(" Std. beta[b] = beta[b] * [SD(mediator) / SD(outcome)]\n")
cat(" Std. beta[a*b] = Std. beta[a] * Std. beta[b]\n\n")
cat(" SD(predictor) : Standard deviation of the predictor\n")
cat(" SD(mediator) : Standard deviation of the mediator\n")
cat(" SD(outcome) : Standard deviation of the outcome\n\n")
}
} # .print.ascii.pwrss.med()
.print.ascii.pwrss.student <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
if (any(x$margin == 0)) {
cat(" H0 (Null Claim) : d - null.d = 0 \n")
cat(" H1 (Alt. Claim) : d - null.d != 0 \n\n")
} else {
cat(" H0 (Null Claim) : d - null.d = margin \n")
cat(" H1 (Alt. Claim) : d - null.d != margin \n\n")
}
} else if (x$alt == "one.sided") {
if (x$ncp.alternative < x$ncp.null) {
if (x$margin == 0) {
cat(" H0 (Null Claim) : d - null.d >= 0 \n")
cat(" H1 (Alt. Claim) : d - null.d < 0 \n\n")
} else {
cat(" H0 (Null Claim) : d - null.d >= margin \n")
cat(" H1 (Alt. Claim) : d - null.d < margin \n\n")
}
} else {
if (any(x$margin == 0)) {
cat(" H0 (Null Claim) : d - null.d <= 0 \n")
cat(" H1 (Alt. Claim) : d - null.d > 0 \n\n")
} else {
cat(" H0 (Null Claim) : d - null.d <= margin \n")
cat(" H1 (Alt. Claim) : d - null.d > margin \n\n")
}
}
} else {
if (x$ncp.alternative > min(x$ncp.null) && x$ncp.alternative < max(x$ncp.null)) {
cat(" H0 (Null Claim) : d - null.d <= min(margin) or \n d - null.d >= max(margin) \n")
cat(" H1 (Alt. Claim) : d - null.d > min(margin) and \n d - null.d < max(margin) \n\n")
} else {
cat(" H0 (Null Claim : d - null.d >= min(margin) and \n d - null.d <= max(margin) \n")
cat(" H1 (Alt. Claim) : d - null.d < min(margin) or \n d - null.d > max(margin) \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Cohen's d = %.*f\n", digits, x$d))
cat(sprintf(" Cohen's d Under Null = %.*f\n", digits, x$null.d))
cat(sprintf(" Margin = %s\n", paste(round(x$margin, digits), collapse = " and ")))
cat(sprintf(" Degrees of Freedom = %.*f\n", 0, x$df))
cat(sprintf(" Non-centrality of Alt. = %.*f\n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %s\n", paste(round(x$ncp.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$t.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Sample Size = ", n.text, "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" Margin : Smallest d - null.d difference that matters \n\n")
}
} # .print.ascii.pwrss.student()
.print.ascii.pwrss.wilcoxon <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
dist <- switch(x$dist,
`normal` = "Normal",
`uniform` = "Uniform",
`double.exponential` = "Double Exponential",
`laplace` = "Laplace",
`logistic` = "Logistic")
method <- switch(x$method,
`guenther` = "Guenther",
`noether` = "Noether")
cat(x$test, "\n\n", sep = "")
cat(" Method : ", method, "\n", sep = "")
cat(" Distribution : ", dist, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
if (x$margin == 0) {
cat(" H0 (Null Claim) : d - null.d = 0 \n")
cat(" H1 (Alt. Claim) : d - null.d != 0 \n\n")
} else {
cat(" H0 (Null Claim) : d - null.d = margin \n")
cat(" H1 (Alt. Claim) : d - null.d != margin \n\n")
}
} else if (x$alt == "one.sided") {
if (x$method == "guenther") {
is.less <- x$ncp < x$null.ncp
} else {
is.less <- x$mean < x$null.mean
}
if (is.less) {
if (x$margin == 0) {
cat(" H0 (Null Claim) : d - null.d >= 0 \n")
cat(" H1 (Alt. Claim) : d - null.d < 0 \n\n")
} else {
cat(" H0 (Null Claim) : d - null.d >= margin \n")
cat(" H1 (Alt. Claim) : d - null.d < margin \n\n")
}
} else {
if (x$margin == 0) {
cat(" H0 (Null Claim) : d - null.d <= 0 \n")
cat(" H1 (Alt. Claim) : d - null.d > 0 \n\n")
} else {
cat(" H0 (Null Claim) : d - null.d <= margin \n")
cat(" H1 (Alt. Claim) : d - null.d > margin \n\n")
}
}
} else {
if (x$method == "guenther") {
is.equivalent <- x$ncp > min(x$null.ncp) && x$ncp < max(x$null.ncp)
} else {
is.equivalent <- x$mean > min(x$null.mean) && x$mean < max(x$null.mean)
}
if (is.equivalent) {
cat(" H0 (Null Claim) : d - null.d <= min(margin) or \n d - null.d >= max(margin) \n")
cat(" H1 (Alt. Claim) : d - null.d > min(margin) and \n d - null.d < max(margin) \n\n")
} else {
cat(" H0 (Null Claim : d - null.d >= min(margin) and \n d - null.d <= max(margin) \n")
cat(" H1 (Alt. Claim) : d - null.d < min(margin) or \n d - null.d > max(margin) \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Cohen's d = %.*f\n", digits, x$d))
cat(sprintf(" Cohen's d Under Null = %.*f\n", digits, x$null.d))
cat(sprintf(" Margin = %s\n", paste(round(x$margin, digits), collapse = " and ")))
if (x$method == "guenther") {
cat(sprintf(" Degrees of Freedom = %.*f\n", 0, x$df))
cat(sprintf(" Non-centrality of Alt. = %.*f\n", digits, x$ncp))
cat(sprintf(" Non-centrality of Null = %s\n", paste(round(x$null.ncp, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$t.alpha, digits), collapse = " and ")))
} else {
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean))
cat(sprintf(" Mean of Null = %s\n", paste(round(x$null.mean, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Sample Size = ", n.text), "\n")
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" Margin : Smallest d - null.d difference that matters \n\n")
}
} # .print.ascii.pwrss.wilcoxon()
.print.ascii.pwrss.gof <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
cat(" H0 (Null Claim) : P[i,j] = P0[i,j] for all (i,j) \n")
cat(" H1 (Alt. Claim) : P[i,j] != P0[i,j] for some (i,j)\n\n")
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Degrees of Freedom = %.*f \n", 0, x$df))
cat(sprintf(" Non-centrality of Alt. = %.*f \n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %.*f \n", digits, x$ncp.null))
cat(sprintf(" Critical Value = %s\n\n",
paste(round(x$chisq.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n") {
cat(paste0(" Total Sample Size = ", round(x$n, digits = digits), " << \n"))
} else {
cat(paste0(" Total Sample Size = ", round(x$n, digits = digits)), "\n")
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" For goodness-of-fit, comparisons are P[i] vs P0[i] \n")
cat(" For independence, comparisons are P[i,j] vs P0[i,j] \n")
cat(" Independence implies (default) P0[i,j] = P[i,.] * P[.,j] \n\n")
cat(" P[i,j] : Joint probability for cell (i,j) \n")
cat(" P[i,.] : Marginal probability for row i (sum over j) \n")
cat(" P[.,j] : Marginal probability for column j (sum over i) \n\n")
}
} # .print.ascii.pwrss.gof()
.print.ascii.pwrss.chisq <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$ncp.null > 0) {
cat(" H0 (Null Claim) : 0 <= ncp <= null.ncp \n")
cat(" H1 (Alt. Claim) : ncp > null.ncp \n\n")
} else {
cat(" H0 (Null Claim) : ncp = null.ncp \n")
cat(" H1 (Alt. Claim) : ncp > null.ncp \n\n")
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Degrees of Freedom = %.*f\n", 0, x$df))
cat(sprintf(" Non-centrality of Alt. = %.*f\n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %.*f\n", digits, x$ncp.null))
cat(sprintf(" Critical Value = %s\n\n",
paste(round(x$chisq.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" ncp : Non-centrality parameter of alt. \n")
cat(" null.ncp : Non-centrality parameter of null \n\n")
}
} # .print.ascii.pwrss.chisq()
.print.ascii.pwrss.t <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : ncp = null.ncp \n")
cat(" H1 (Alt. Claim) : ncp != null.ncp \n\n")
} else if (x$alt == "one.sided") {
if (x$ncp.alternative < x$ncp.null) {
cat(" H0 (Null Claim) : ncp >= null.ncp \n")
cat(" H1 (Alt. Claim) : ncp < null.ncp \n\n")
} else {
cat(" H0 (Null Claim) : ncp <= null.ncp \n")
cat(" H1 (Alt. Claim) : ncp > null.ncp \n\n")
}
} else {
if (x$ncp.alternative > min(x$ncp.null) && x$ncp.alternative < max(x$ncp.null)) {
cat(" H0 (Null Claim) : ncp <= min(null.ncp) or \n ncp >= max(null.ncp) \n")
cat(" H1 (Alt. Claim) : ncp > min(null.ncp) and \n ncp < max(null.ncp) \n\n")
} else {
cat(" H0 (Null Claim) : ncp >= min(null.ncp) and \n ncp <= max(null.ncp) \n")
cat(" H1 (Alt. Claim) : ncp < min(null.ncp) or \n ncp > max(null.ncp) \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
if (isFALSE(is.infinite(x$df))) {
cat(sprintf(" Degrees of Freedom = %.*f\n", 0, x$df))
}
cat(sprintf(" Non-centrality of Alt. = %.*f\n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %s\n", paste(round(x$ncp.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$t.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " << \n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" ncp : Non-centrality parameter of Alt. \n")
cat(" null.ncp : Non-centrality parameter of Null \n\n")
}
} # .print.ascii.pwrss.t()
.print.ascii.pwrss.z <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : mean = null.mean \n")
cat(" H1 (Alt. Claim) : mean != null.mean \n\n")
} else if (x$alt == "one.sided") {
if (x$mean.alternative < x$mean.null) {
cat(" H0 (Null Claim) : mean >= null.mean \n")
cat(" H1 (Alt. Claim) : mean < null.mean \n\n")
} else {
cat(" H0 (Null Claim) : mean <= null.mean \n")
cat(" H1 (Alt. Claim) : mean > null.mean \n\n")
}
} else {
if (x$mean.alternative > min(x$mean.null) && x$mean.alternative < max(x$mean.null)) {
cat(" H0 (Null Claim) : mean <= min(null.mean) or \n mean >= max(null.mean) \n")
cat(" H1 (Alt. Claim) : mean > min(null.mean) and \n mean < max(null.mean) \n\n")
} else {
cat(" H0 (Null Claim) : mean >= min(null.mean) and \n mean <= max(null.mean) \n")
cat(" H1 (Alt. Claim) : mean < min(null.mean) or \n mean > max(null.mean) \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" Mean of Null = %s\n", paste(round(x$mean.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" mean : Mean of alt. \n")
cat(" null.mean : Mean of null \n\n")
}
} # .print.ascii.pwrss.z()
.print.ascii.pwrss.binom <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : prob = null.prob \n")
cat(" H1 (Alt. Claim) : prob != null.prob \n\n")
} else if (x$alt == "one.sided") {
if (x$prob.alt < x$prob.null) {
cat(" H0 (Null Claim) : prob >= null.prob \n")
cat(" H1 (Alt. Claim) : prob < null.prob \n\n")
} else {
cat(" H0 (Null Claim) : prob <= null.prob \n")
cat(" H1 (Alt. Claim) : prob > null.prob \n\n")
}
} else {
if (x$prob.alt > min(x$prob.null) && x$prob.alt < max(x$prob.null)) {
cat(" H0 (Null Claim) : prob <= min(null.prob) or \n prob >= max(null.prob) \n")
cat(" H1 (Alt. Claim) : prob > min(null.prob) and \n prob < max(null.prob) \n\n")
} else {
cat(" H0 (Null Claim) : prob >= min(null.prob) and \n prob <= max(null.prob) \n")
cat(" H1 (Alt. Claim) : prob < min(null.prob) or \n prob > max(null.prob) \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Size = %.*f\n", 0, x$size))
cat(sprintf(" Probability Under Alt. = %.*f\n", digits, x$prob.alt))
cat(sprintf(" Probability Under Null = %s\n", paste(round(x$prob.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$binom.alpha, 0), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" prob : Probability under alt. \n")
cat(" null.prob : Probability under null \n\n")
}
} # .print.ascii.pwrss.binom()
.print.ascii.pwrss.f <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$ncp.null > 0) {
cat(" H0 (Null Claim) : 0 <= ncp <= null.ncp \n")
cat(" H1 (Alt. Claim) : ncp > null.ncp \n\n")
} else {
cat(" H0 (Null Claim) : ncp = null.ncp \n")
cat(" H1 (Alt. Claim) : ncp > null.ncp \n\n")
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Num. Deg. of Freedom = %.*f \n", 0, x$df1))
cat(sprintf(" Denom. Deg. of Freedom = %.*f \n", 0, x$df2))
cat(sprintf(" Non-centrality of Alt. = %.*f \n", digits, x$ncp.alternative))
cat(sprintf(" Non-centrality of Null = %.*f \n", digits, x$ncp.null))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$f.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" ncp : Non-centrality parameter of alt. \n")
cat(" null.ncp : Non-centrality parameter of null \n\n")
}
} # .print.ascii.pwrss.f()
.print.ascii.pwrss.ancova <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n.total",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$null.ncp == 0) {
cat(" H0 (Null Claim) : eta.squared = 0 \n")
cat(" H1 (Alt. Claim) : eta.squared > 0 \n\n")
} else {
cat(" H0 (Null Claim) : 0 <= eta.squared <= null.eta.squared \n")
cat(" H1 (Alt. Claim) : eta.squared > null.eta.squared\n\n")
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Design = %s \n", x$effect))
cat(sprintf(" Num. Deg. of Freedom = %.*f \n", 0, x$df1))
cat(sprintf(" Denom. Deg. of Freedom = %.*f \n", 0, x$df2))
cat(sprintf(" Non-centrality of Alt. = %.*f \n", digits, x$ncp))
cat(sprintf(" Non-centrality of Null = %.*f \n", digits, x$null.ncp))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$f.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n.total") {
cat(paste0(" Total Sample Size = ", round(x$n.total, digits), " <<\n"))
} else {
cat(paste0(" Total Sample Size = ", round(x$n.total, digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
if (x$null.ncp != 0) cat(" null.eta.squared : (Partial) Eta-squared under null \n")
cat(" eta.squared : (Partial) Eta-squared under alt. \n\n")
}
} # .print.ascii.pwrss.ancova()
.print.ascii.pwrss.contrast <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n.total",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
cat(" H0 (Null Claim) : psi = 0 \n")
cat(" H1 (Alt. Claim) : psi != 0 \n\n")
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Contrast Est. (psi) = %.*f \n", digits, x$psi))
cat(sprintf(" Standardized psi (d) = %.*f \n", digits, x$d))
cat(sprintf(" Degrees of Freedom = %.*f \n", 0, x$df))
cat(sprintf(" Non-centrality of Alt. = %.*f \n", digits, x$ncp))
cat(sprintf(" Non-centrality of Null = %.*f \n", digits, x$null.ncp))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$t.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
if (x$requested == "n.total") {
cat(paste0(" Total Sample Size = ", round(x$n.total, digits), " <<\n"))
} else {
cat(paste0(" Total Sample Size = ", round(x$n.total, digits), "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" psi : Contrast estimate, sum(contrast[i] * mu[i]) \n")
cat(" d : Standardized contrast estimate \n\n")
}
} # .print.ascii.pwrss.contrast()
.print.ascii.pwrss.contrasts <- function(x, data = NULL, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n.total",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
# Header
cat(x$test, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
cat(" H0 (Null Claim) : psi = 0 \n")
cat(" H1 (Alt. Claim) : psi != 0 \n\n")
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
adjust.alpha <- switch(x$adjust.alpha,
`none` = "None",
`fdr` = "False Discovery Rate",
`hochberg` = "Hochberg (1988)",
`BH` = "Benjamini & Hochberg (1995)",
`BY` = "Benjamini & Yakutieli (2001)",
`holm` = "Holm (1979)",
`hommel` = "Hommel (1988)",
`bonferroni` = "Bonferroni",
`tukey` = "Tukey")
cat(sprintf(" Alpha Adjustment = %s \n", adjust.alpha))
cat(sprintf(" Adjusted Alpha = %.*f \n", digits, x$alpha))
cat(sprintf(" Non-centrality of Null = %.*f \n\n", digits, x$null.ncp))
}
cat(line)
cat("Results\n")
cat(line)
if (!is.null(x$data)) {
print(x$data, row.names = FALSE)
cat("\n")
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" psi : Contrast estimate, sum(contrast[i] * mu[i])\n")
cat(" d : Standardized contrast estimate \n")
cat(" ncp : Non-centrality parameter under alt. \n\n")
}
} # .print.ascii.pwrss.contrasts()
.print.ascii.pwrss.fisher <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
method <- switch(x$method,
`z` = "Normal Approximation",
`exact` = "Fisher's Exact")
cat(x$test, "\n\n", sep = "")
cat(" Method : ", method, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
if (any(x$margin == 0)) {
cat(" H0 (Null Claim) : prob1 - prob2 = 0 \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 != 0 \n\n")
} else {
cat(" H0 (Null Claim) : prob1 - prob2 = margin \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 != margin \n\n")
}
} else if (x$alt == "one.sided") {
if (x$delta < 0) {
if (any(x$margin == 0)) {
cat(" H0 (Null Claim) : prob1 - prob2 >= 0 \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 < 0 \n\n")
} else {
cat(" H0 (Null Claim) : prob1 - prob2 >= margin \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 < margin \n\n")
}
} else {
if (any(x$margin == 0)) {
cat(" H0 (Null Claim) : prob1 - prob2 <= 0 \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 > 0 \n\n")
} else {
cat(" H0 (Null Claim) : prob1 - prob2 <= margin \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 > margin \n\n")
}
}
} else {
if (x$delta > min(x$margin) && x$delta < max(x$margin)) {
cat(" H0 (Null Claim) : prob1 - prob2 <= min(margin) or \n prob1 - prob2 >= max(margin) \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 > min(margin) and \n prob1 - prob2 < max(margin) \n\n")
} else {
cat(" H0 (Null Claim) : prob1 - prob2 >= min(margin) and \n prob1 - prob2 <= max(margin) \n")
cat(" H1 (Alt. Claim) : prob1 - prob2 < min(margin) or \n prob1 - prob2 > max(margin) \n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" prob1 - prob2 = %.*f\n", digits, x$delta))
cat(sprintf(" Odds Ratio = %.*f\n", digits, x$odds.ratio))
if (x$method == "z") {
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" Mean of Null = %s\n", paste(round(x$mean.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
} else {
cat("\n")
}
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Sample Size = ", n.text, "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits = digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" prob1 : Probability of success in the first group \n")
cat(" prob2 : Probability of success in the second group \n")
if (any(x$margin != 0))
cat(" margin : Smallest prob1 - prob2 that matters \n")
cat(" Odds Ratio : Odds(prob1) / Odds(prob2) \n")
cat(" Odds(prob1) : prob1 / (1 - prob1) \n")
cat(" Odds(prob2) : prob2 / (1 - prob2) \n\n")
}
} # .print.ascii.pwrss.fisher()
.print.ascii.pwrss.mcnemar <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
method <- switch(x$method,
`z` = "Normal Approximation",
`exact` = "McNemar's Exact")
cat(x$test, "\n\n", sep = "")
cat(" Method : ", method, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : prob10 - prob01 = 0\n")
cat(" H1 (Alt. Claim) : prob10 - prob01 != 0\n\n")
} else if (x$alt == "one.sided") {
if (x$delta < 0) {
cat(" H0 (Null Claim) : prob10 - prob01 >= 0\n")
cat(" H1 (Alt. Claim) : prob10 - prob01 < 0\n\n")
} else {
cat(" H0 (Null Claim) : prob10 - prob01 <= 0\n")
cat(" H1 (Alt. Claim) : prob10 - prob01 > 0\n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
cat(sprintf(" Odds Ratio = %.*f\n", digits, x$odds.ratio))
cat(sprintf(" prob10 - prob01 = %.*f\n", digits, x$delta))
if (x$method == "exact") {
cat(sprintf(" Size of Disc. Pairs = %.*f \n", 0, x$size))
cat(sprintf(" prob10 || DP for Alt. = %.*f \n", digits, x$prob.alternative))
cat(sprintf(" prob10 || DP for Null = %s \n", paste(round(x$prob.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s \n\n", paste(round(x$binom.alpha, digits), collapse = " and ")))
} else {
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" Mean of Null = %s\n", paste(round(x$mean.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n.paired, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Paired Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Paired Sample Size = ", n.text, "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" prob10 : Joint prob. of observing {1,0} \n")
cat(" prob01 : Joint prob. of observing {0,1} \n")
cat(" Odds Ratio : prob10 / prob01 \n")
cat(" prob10 | DP : Conditional prob. of observing {1,0} \n among DP, prob10 / (prob10 + prob01) \n")
cat(" DP : Discordant pairs \n\n")
}
} # .print.ascii.pwrss.mcnemar()
.print.ascii.pwrss.oneprop <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
method <- switch(x$method,
`z` = "Normal Approximation",
`exact` = "Exact")
cat(x$test, "\n\n", sep = "")
if (x$method == "exact") {
cat(" Method : ", method, "\n\n", sep = "")
} else {
stderr <- switch(x$std.err,
`alternative` = "Alternative",
`null` = "Null")
cat(" Method : ", method, "\n", sep = "")
cat(" Continuity Correction : ", x$correct, "\n", sep = "")
cat(" Arcsine Transformation : ", x$arcsine, "\n", sep = "")
cat(" Standard Error : Calculated From ", stderr, "\n\n", sep = "")
}
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
cat(" H0 (Null Claim) : prob - null.prob = 0\n")
cat(" H1 (Alt. Claim) : prob - null.prob != 0\n\n")
} else if (x$alt == "one.sided") {
if (x$delta < 0) {
cat(" H0 (Null Claim) : prob - null.prob >= 0\n")
cat(" H1 (Alt. Claim) : prob - null.prob < 0\n\n")
} else {
cat(" H0 (Null Claim) : prob - null.prob <= 0\n")
cat(" H1 (Alt. Claim) : prob - null.prob > 0\n\n")
}
} else if (x$alt == "two.one.sided") {
if (x$delta[1] > 0 && x$delta[2] < 0) {
cat(" H0 (Null Claim) : prob - min(null.prob) <= 0 or \n prob - max(null.prob) >= 0\n")
cat(" H1 (Alt. Claim) : prob - min(null.prob) > 0 and \n prob - max(null.prob) < 0\n\n")
} else {
cat(" H0 (Null Claim) : prob - min(null.prob) >= 0 and \n prob - max(null.prob) <= 0\n")
cat(" H1 (Alt. Claim) : prob - min(null.prob) < 0 or \n prob - max(null.prob) > 0\n\n")
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
delta.text <- paste(round(x$delta, digits), collapse = " and ")
cat(sprintf(" prob - null.prob = %s\n", delta.text))
or.text <- paste(round(x$odds.ratio, digits), collapse = " and ")
cat(sprintf(" Odds Ratio = %s\n", or.text))
if (x$method == "exact") {
cat(sprintf(" Size = %.*f\n", 0, x$size))
cat(sprintf(" Prob. Under Alt = %.*f\n", digits, x$prob.alternative))
cat(sprintf(" Prob. Under Null = %s\n", paste(round(x$prob.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$binom.alpha, digits), collapse = " and ")))
} else {
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" Mean of Null = %s\n", paste(round(x$mean.null, digits), collapse = " and ")))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Sample Size = ", n.text, "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
cat(" Odds Ratio : Odds(prob) / Odds(null.prob) \n")
cat(" Odds(prob) : prob / (1 - prob) \n")
cat(" Odds(null.prob) : null.prob / (1 - null.prob) \n\n")
}
} # .print.ascii.pwrss.oneprop()
.print.ascii.pwrss.steiger <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n", sep = "")
cat(" Common Index : ", x$common, "\n\n", sep = "")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
if (x$common) {
cat(" H0 (Null Claim) : rho12 - rho13 = 0\n")
cat(" H1 (Alt. Claim) : rho12 - rho13 != 0\n\n")
} else {
cat(" H0 (Null Claim) : rho12 - rho34 = 0\n")
cat(" H1 (Alt. Claim) : rho12 - rho34 != 0\n\n")
}
} else if (x$alt == "one.sided") {
if (x$delta < 0) {
if (x$common) {
cat(" H0 (Null Claim) : rho12 - rho13 >= 0\n")
cat(" H1 (Alt. Claim) : rho12 - rho13 < 0\n\n")
} else {
cat(" H0 (Null Claim) : rho12 - rho34 >= 0\n")
cat(" H1 (Alt. Claim) : rho12 - rho34 < 0\n\n")
}
} else {
if (x$common) {
cat(" H0 (Null Claim) : rho12 - rho13 <= 0\n")
cat(" H1 (Alt. Claim) : rho12 - rho13 > 0\n\n")
} else {
cat(" H0 (Null Claim) : rho12 - rho34 <= 0\n")
cat(" H1 (Alt. Claim) : rho12 - rho34 > 0\n\n")
}
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
if (x$common) {
cat(sprintf(" rho12 - rho13 = %.*f\n", digits, x$delta))
} else {
cat(sprintf(" rho12 - rho34 = %.*f\n", digits, x$delta))
}
cat(sprintf(" Cohen's q = %.*f\n", digits, x$q))
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" SD of Alt. = %.*f\n", digits, x$sd.alternative))
cat(sprintf(" Mean of Null = %.*f\n", digits, x$mean.null))
cat(sprintf(" SD of Null = %.*f\n", digits, x$sd.null))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Sample Size = ", n.text, "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
if (x$common) {
cat(" rho12 : Correlation between variable V1 and V2 \n")
cat(" rho13 : Correlation between variable V1 and V3 \n\n")
} else {
cat(" rho12 : Correlation between variable V1 and V2 \n")
cat(" rho34 : Correlation between variable V3 and V4 \n\n")
}
}
} # .print.ascii.pwrss.steiger()
.print.ascii.pwrss.twocors <- function(x, digits = 3, verbose = 1, ...) {
UL <- UR <- LL <- LR <- "+"
HL <- "-"
VL <- "|"
HR <- strrep(HL, 50)
line <- paste0("-", strrep("-", 50), "\n")
cat(UL, HR, UR, "\n", sep = "")
cat(VL, ifelse(x$requested == "n",
" SAMPLE SIZE CALCULATION ",
" POWER CALCULATION "),
VL, "\n", sep = "")
cat(LL, HR, LR, "\n\n", sep = "")
cat(x$test, "\n\n")
cat(line)
cat("Hypotheses\n")
cat(line)
if (x$alt == "two.sided") {
if (x$design %in% c("independent", "paired")) {
cat(" H0 (Null Claim) : rho1 - rho2 = 0\n")
cat(" H1 (Alt. Claim) : rho1 - rho2 != 0\n\n")
} else {
cat(" H0 (Null Claim) : rho - null.rho = 0\n")
cat(" H1 (Alt. Claim) : rho - null.rho != 0\n\n")
}
} else if (x$alt == "one.sided") {
if (x$delta < 0) {
if (x$design %in% c("independent", "paired")) {
cat(" H0 (Null Claim) : rho1 - rho2 >= 0\n")
cat(" H1 (Alt. Claim) : rho1 - rho2 < 0\n\n")
} else {
cat(" H0 (Null Claim) : rho - null.rho >= 0\n")
cat(" H1 (Alt. Claim) : rho - null.rho < 0\n\n")
}
} else {
if (x$design %in% c("independent", "paired")) {
cat(" H0 (Null Claim) : rho1 - rho2 <= 0\n")
cat(" H1 (Alt. Claim) : rho1 - rho2 > 0\n\n")
} else {
cat(" H0 (Null Claim) : rho - null.rho <= 0\n")
cat(" H1 (Alt. Claim) : rho - null.rho > 0\n\n")
}
}
}
if (verbose == 2) {
cat(line)
cat("Key Parameters\n")
cat(line)
if (x$design %in% c("independent", "paired")) {
cat(sprintf(" rho1 - rho2 = %.*f\n", digits, x$delta))
} else {
cat(sprintf(" rho - null.rho = %.*f\n", digits, x$delta))
}
cat(sprintf(" Cohen's q = %.*f\n", digits, x$q))
cat(sprintf(" Mean of Alt. = %.*f\n", digits, x$mean.alternative))
cat(sprintf(" SD of Alt. = %.*f\n", digits, x$sd.alternative))
cat(sprintf(" Mean of Null = %.*f\n", digits, x$mean.null))
cat(sprintf(" SD of Null = %.*f\n", digits, x$sd.null))
cat(sprintf(" Critical Value = %s\n\n", paste(round(x$z.alpha, digits), collapse = " and ")))
}
cat(line)
cat("Results\n")
cat(line)
n.text <- paste(round(x$n, digits), collapse = " and ")
if (x$requested == "n") {
cat(paste0(" Sample Size = ", n.text, " <<\n"))
} else {
cat(paste0(" Sample Size = ", n.text, "\n"))
}
cat(sprintf(" Type 1 Error (alpha) = %.*f\n", digits, x$alpha))
cat(sprintf(" Type 2 Error (beta) = %.*f\n", digits, 1 - x$power))
if (x$requested == "power") {
cat(paste0(" Statistical Power = ", round(x$power, digits), " <<\n\n"))
} else {
cat(paste0(" Statistical Power = ", round(x$power, digits), "\n\n"))
}
if (verbose == 2) {
cat(line)
cat("Definitions\n")
cat(line)
if (x$design %in% c("independent", "paired")) {
cat(" rho1 : Correlation in group 1 \n")
cat(" rho2 : Correlation in group 2 \n\n")
} else {
cat(" rho : Correlation under alt. \n")
cat(" null.rho : Correlation under null \n\n")
}
}
} # .print.ascii.pwrss.twocors()
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.