Functions to Simultaneously Infer Causal Graphs and Genetic Architecture
|Author||Elias Chaibub Neto <email@example.com> and Brian S. yandell <firstname.lastname@example.org>|
|Date of publication||2014-03-14 00:03:29|
|Maintainer||Brian S. Yandell <email@example.com>|
|License||GPL (>= 2)|
acyclic: Acyclic graph example
bic: Pre-compute BIC values for qtlnet sampling.
cyclica: Cyclic graph (a) example
cyclicb: Cyclic graph (b) example
cyclicc: Cyclic graph (c) example
diag: QTL network diagnostic routines
generate: Generate QTLs ane phenotypes from cross object
glxnet: Generate and graph Glx network
igraph: qtlnet plot using igraph
loci: QTL architecture per node as list
mcmc: Sample genetic architecture and QTL network
parallel: Code to parallelize use of qtlnet
parents: Determine and group node-parent combinations.
Pscdbp: Cross and qtlnet objects with Ghazalpour et al. (2006) data....
qdg: Produces a directed graph using QDG algorithm
qdg.perm.test: Conduct permutation test for LOD score of edge direction on...
sem: Score directed graphs outputed by qdg using structural...
subset: Catenate or subset qtlnet object(s).
summary: summary of model average network and posterior table
write: write qtlnet as text file