qtlnet: Causal Inference of QTL Networks

Functions to Simultaneously Infer Causal Graphs and Genetic Architecture

AuthorElias Chaibub Neto <echaibub@hotmail.com> and Brian S. yandell <byandell@wisc.edu>
Date of publication2014-03-14 00:03:29
MaintainerBrian S. Yandell <byandell@wisc.edu>
LicenseGPL (>= 2)
Version1.3.6
http://www.stat.wisc.edu/~yandell/sysgen

View on CRAN

Functions

acyclic Man page
acyclic.data Man page
acyclic.DG Man page
acyclic.qdg Man page
acyclic.qtl Man page
best.qtlnet Man page
bic.join Man page
bic.qtlnet Man page
check.qtlnet Man page
c.qtlnet Man page
cyclica Man page
cyclica.data Man page
cyclica.qtl Man page
cyclicb Man page
cyclicb.data Man page
cyclicb.qtl Man page
cyclicc Man page
cyclicc.data Man page
cyclicc.qtl Man page
dist.qtlnet Man page
edgematch.qtlnet Man page
est.qtlnet Man page
generate.qtl.markers Man page
generate.qtl.pheno Man page
glxnet Man page
glxnet.cross Man page
glxnet.qdg Man page
glxnet.qtl Man page
graph.qdg Man page
graph.qtlnet Man page
group.qtlnet Man page
igraph.qtlnet Man page
init.qtlnet Man page
loci.qtlnet Man page
mcmc.qtlnet Man page
mds.qtlnet Man page
parallel.qtlnet Man page
parents.qtlnet Man page
plotbic.qtlnet Man page
plot.qtlnet Man page
print.qdg Man page
print.qdg.perm.test Man page
print.qdg.sem Man page
print.qtlnet Man page
print.summary.qtlnet Man page
Pscdbp Man page
Pscdbp.bic Man page
Pscdbp.qtlnet Man page
qdg Man page
qdg.perm.test Man page
qdg.sem Man page
qtlnet Man page
size.qtlnet Man page
subset.qtlnet Man page
summary.parents.qtlnet Man page
summary.qdg Man page
summary.qdg.perm.test Man page
summary.qdg.sem Man page
summary.qtlnet Man page
write.qtlnet Man page

Files

qtlnet
qtlnet/inst
qtlnet/inst/parallel
qtlnet/inst/parallel/Phase1.R
qtlnet/inst/parallel/Phase4.R
qtlnet/inst/parallel/params.txt
qtlnet/inst/parallel/Phase3.R
qtlnet/inst/parallel/notes.txt
qtlnet/inst/parallel/Phase2.R
qtlnet/inst/parallel/Phase5.R
qtlnet/inst/graphviz
qtlnet/inst/graphviz/qtlnet.R
qtlnet/inst/graphviz/qdg.R
qtlnet/inst/graphviz/Rgraphviz.R
qtlnet/inst/graphviz/graphviz.Rd
qtlnet/inst/graphviz/plot.qdg.Rd
qtlnet/inst/example
qtlnet/inst/example/notes.txt
qtlnet/inst/example/qdg.txt
qtlnet/inst/example/codetree.txt
qtlnet/inst/doc
qtlnet/inst/doc/qtlnet.pdf
qtlnet/inst/doc/qtlnet.R
qtlnet/inst/doc/qtlnet.Rnw
qtlnet/NAMESPACE
qtlnet/data
qtlnet/data/acyclic.RData
qtlnet/data/Pscdbp.RData
qtlnet/data/Pscdbp.bic.RData
qtlnet/data/glxnet.RData
qtlnet/data/cyclica.RData
qtlnet/data/cyclicb.RData
qtlnet/data/cyclicc.RData
qtlnet/data/datalist
qtlnet/data/Pscdbp.qtlnet.RData
qtlnet/R
qtlnet/R/write.R qtlnet/R/perm.R qtlnet/R/scanone.R qtlnet/R/solution.R qtlnet/R/parallel.R qtlnet/R/lod.score.R qtlnet/R/average.R qtlnet/R/qdg.R qtlnet/R/score.R qtlnet/R/cov.matrix.R qtlnet/R/generate.R qtlnet/R/log.like.R qtlnet/R/diag.R qtlnet/R/bic.R qtlnet/R/summary.R qtlnet/R/mcmc.R qtlnet/R/sem.R qtlnet/R/loci.R qtlnet/R/igraph.R
qtlnet/vignettes
qtlnet/vignettes/qtlnet.Rnw
qtlnet/MD5
qtlnet/build
qtlnet/build/vignette.rds
qtlnet/DESCRIPTION
qtlnet/man
qtlnet/man/diag.Rd qtlnet/man/igraph.Rd qtlnet/man/sem.Rd qtlnet/man/loci.Rd qtlnet/man/Pscdbp.Rd qtlnet/man/parallel.Rd qtlnet/man/glxnet.Rd qtlnet/man/bic.Rd qtlnet/man/write.Rd qtlnet/man/acyclic.Rd qtlnet/man/parents.Rd qtlnet/man/cyclicc.Rd qtlnet/man/cyclica.Rd qtlnet/man/qdg.Rd qtlnet/man/generate.Rd qtlnet/man/qdg.perm.test.Rd qtlnet/man/cyclicb.Rd qtlnet/man/subset.Rd qtlnet/man/summary.Rd qtlnet/man/mcmc.Rd

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