Man pages for qtlnet
Causal Inference of QTL Networks
| acyclic | Acyclic graph example |
| bic | Pre-compute BIC values for qtlnet sampling. |
| cyclica | Cyclic graph (a) example |
| cyclicb | Cyclic graph (b) example |
| cyclicc | Cyclic graph (c) example |
| diag | QTL network diagnostic routines |
| generate | Generate QTLs ane phenotypes from cross object |
| glxnet | Generate and graph Glx network |
| igraph | qtlnet plot using igraph |
| loci | QTL architecture per node as list |
| mcmc | Sample genetic architecture and QTL network |
| parallel | Code to parallelize use of qtlnet |
| parents | Determine and group node-parent combinations. |
| Pscdbp | Cross and qtlnet objects with Ghazalpour et al. (2006) data.... |
| qdg | Produces a directed graph using QDG algorithm |
| qdg.perm.test | Conduct permutation test for LOD score of edge direction on... |
| sem | Score directed graphs outputed by qdg using structural... |
| subset | Catenate or subset qtlnet object(s). |
| summary | summary of model average network and posterior table |
| write | write qtlnet as text file |
