Description Usage Arguments See Also Examples
Generate QTLs ane phenotype data for individual examples from cross. These are utility routines to illustrate the examples. They are not meant for users per se.
1 2 3 | generate.qtl.markers(cross, n.phe, nqtl = 3)
generate.qtl.pheno(name, cross, bp, bq, stdev, allqtl,
burnin = 2000, geno)
|
cross |
object of class |
name |
character string for example name |
bp |
vector or matrix of coefficients for dependencies between phenotypes; see cyclic and acyclic examples |
bq |
vector or matrix of coefficients for QTL effects on phenotypes; see cyclic and acyclic examples |
stdev |
vector of standard deviations per phenotype |
allqtl |
list of objects of class |
burnin |
number of burnin cycles for MCMC; default is 2000 |
geno |
genotypes at markers, typically extracted with
|
n.phe |
number of phenotypes |
nqtl |
number of QTL |
acyclic
,
cyclica
,
cyclicb
,
cyclicc
1 2 3 4 5 6 7 |
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