SimData: Simulated Dataset

In r.jive: Perform JIVE Decomposition for Multi-Source Data

Description

These data were simulated as described in Section 2.4 of Lock et al., 2013. There are two simulated sources, with rank 1 joint structure and rank 1 structure individual to each source.

Usage

data(SimData)

Format

This dataset is a list of two entries:

• Data[[1]] (Data$Data1): 50 variables (rows) and 100 samples (columns)

• Data[[2]] (Data$Data2): 50 variables (rows) and 100 samples (columns)

The 100 columns are shared by the sources.

References

Lock, EF, KA Hoadley, JS Marron, and AB Nobel. 2013. ”Joint and Individual Variation Explained (JIVE) for Integrated Analysis of Multiple Data Types.” The Annals of Applied Statistics 7 (1): 523-42.

O'Connell, M. J., & Lock, E.F. (2016). R.JIVE for Exploration of Multi-Source Molecular Data. Bioinformatics advance access: 10.1093/bioinformatics/btw324.

r.jive documentation built on Nov. 17, 2020, 9:07 a.m.