m_style_stick: Specify Styling for Stick

In r3dmol: Create Interactive 3D Visualizations of Molecular Data

Description

Styling options for the stick representation. Used inside m_add_style() and m_set_style().

Usage

m_style_stick(
  radius = 0.3,
  singleBonds = FALSE,
  colorScheme = "default",
  color = NULL,
  opacity = 1,
  hidden = FALSE
)

Arguments

radius	Radius of sticks.
singleBonds	Draw all bonds as single bonds if TRUE.
colorScheme	Specify scheme to color the atoms by. Default is "default". Other choies are "Carbon", ssPyMOL", "ssJmol", "Jmol", "default", "amino", "shapely", "nucleic", "chain", "chainHetatm", "prop".
color	Fixed coloring, overrides colorScheme.
opacity	Opacity, must be the same for all atoms in the model.
hidden	Do not show.

Examples

r3dmol() %>%
  m_add_model(data = pdb_1j72, format = "pdb") %>%
  m_set_style(style = m_style_stick(opacity = 0.4)) %>%
  m_zoom_to()

r3dmol documentation built on March 14, 2021, 5:08 p.m.