exData: Example dataset

Description Usage Format

Description

A dataset containing example inputs.

Usage

1

Format

A list with seven objects

strain

a character vector containing the strain names.

subspecies

a factor specifying to which subspecie the strains belong to.

HCN

a numerical vector with their corresponding median genome wide coverage.

fastafiles

a character vector containing the file names of the minicircle sequences in fasta format.

ucs

a character vector containing the file names of the cluster information in uc format.

mapstats

a character vector containing the files names of the mapping statistics in text format.

depthstats

a character vector containing the files names of the depth statistics in text format.


rKOMICS documentation built on July 21, 2021, 5:07 p.m.