rKOMICS: Minicircle Sequence Cluster (MSC) Analyses

Description Details Author(s) References See Also


It establishes a critical framework to manipulate, explore and extract biologically relevant information from mitochondrial minicircle assemblies in tens to hundreds of samples simultaneously and efficiently. This should facilitate research that aims to develop new molecular markers for identifying species-specific minicircles, or to study the ancestry of parasites for complementary insights into their evolutionary history.


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Frederik Van den Broeck frederik.vandenbroeck@kuleuven.be

Manon Geerts mgeerts@itg.be


Van den Broeck F, Savill NJ, Imamura H, Sanders M, Maes I, Cooper S, et al. Ecological divergence and hybridization of Neotropical Leishmania parasites. Proc Natl Acad Sci U S A. 2020;117. doi: 10.1073/pnas.1920136117.

See Also

Github: https://frebio.github.io/

komics-suite: https://frebio.github.io/komics/

rKOMICS documentation built on July 21, 2021, 5:07 p.m.