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rescue: Bootstrap Imputation for Single-Cell RNA-Seq Data
Given a log-transformed expression matrix and list of informative genes: subsample informative genes, cluster samples using shared nearest neighbors clustering, estimate missing expression values with the distribution mean of means extrapolated from these cell clusterings, and return an imputed expression matrix. See Tracy, S., Yuan, G.C. and Dries, R. (2019) <doi:10.1186/s12859-019-2977-0> for more details.
Getting started
Browse package contents
Package details |
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| Author | Sam Tracy & Ruben Dries |
| Maintainer | Sam Tracy <seasamgo@gmail.com> |
| License | GPL-2 | GPL-3 |
| Version | 1.0.3 |
| URL | https://github.com/seasamgo/rescue |
| Package repository | View on CRAN |
| Installation |
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