Implementation of functions for spectral similarity/dissimilarity analysis and memory-based learning (MBL) for non-linear modeling in complex spectral datasets. In chemometrics MBL is also known as local modeling.

Install the latest version of this package by entering the following in R:

`install.packages("resemble")`

Author | Leonardo Ramirez-Lopez [aut, cre], Antoine Stevens [aut] |

Date of publication | 2016-03-04 00:11:00 |

Maintainer | Leonardo Ramirez-Lopez <ramirez.lopez.leo@gmail.com> |

License | GPL (>= 3) |

Version | 1.2.2 |

http://l-ramirez-lopez.github.io/resemble/ |

**cms:** Function for computing the mean of each column in a 'matrix'

**colSds:** Function for computing the standard deviation of each column...

**corDiss:** Correlation and moving correlation dissimilarity measurements...

**cSds:** Standard deviation of columns

**e2m:** A function for transforming a matrix from its Euclidean spcae...

**fastDist:** A fast distance algorithm for two matrices written in C++

**fastDistVV:** A fast (parallel for linux) algorithm of (squared) Euclidean...

**fastDistVVL:** A fast (serial) algorithm of (squared) Euclidean...

**fDiss:** Euclidean, Mahalanobis and cosine dissimilarity measurements

**fopls:** fast orthogonal scores algorithn of partial leat squares...

**getPredictions:** Extract predictions from an object of class 'mbl'

**gprCv:** Cross validation for Gaussian process regression

**gprdp:** Gaussian process regression with linear kernel (gprdp)

**gpr.dp:** Gaussian process regression with dot product covariance

**isubset:** iterator that re-organize and subset a matrix based on...

**locFitnpred:** Local multivariate regression

**mbl:** A function for memory-based learning (mbl)

**mblControl:** A function that controls some aspects of the memory-based...

**minDissV:** A function to compute indices of minimum values of a distance...

**movcorDist:** Moving/rolling correlation distance of two matrices

**neigCleaning:** A function for identifying samples that do not belong to any...

**opls:** orthogonal scores algorithn of partial leat squares (opls)

**orthoDiss:** A function for computing dissimilarity matrices from...

**orthoProjection:** Orthogonal projections using partial least squares and...

**pgpcv_cpp:** Internal Cpp function for performing leave-group-out cross...

**plot.mbl:** Plot method for an object of class 'mbl'

**plot.orthoProjection:** Plot method for an object of class 'orthoProjection'

**plsCv:** Cross validation for PLS regression

**pplscv_cpp:** Internal Cpp function for performing leave-group-out cross...

**predgprdp:** Prediction function for the 'gprdp' function (Gaussian...

**pred.gpr.dp:** Prediction function for "gpr.dp" (Gaussian process regression...

**predopls:** Prediction function for the 'opls' and 'opls2' functions

**print.localOrthoDiss:** Print method for an object of class 'orthoDiss'

**print.mbl:** Print method for an object of class 'mbl'

**print.orthoProjection:** Print method for an object of class 'orthoProjection'

**projectpls:** Projection function for the 'opls' function

**resemble-package:** Overview of the functions in the resemble package

**sid:** A function for computing the spectral information divergence...

**simEval:** A function for evaluating similarity/dissimilarity matrices...

**smpl:** A simple ramdom sampling function

**sqrtSm:** Square root of (square) symetric matrices

**waplswCpp:** Internal Cpp function for computing the weights of the PLS...

**wapls.weights:** Internal function for computing the weights of the PLS...

**wcolSds:** Function for identifiying the column in a 'matrix' with the...

**which_min:** A function to compute row-wise index of minimum values of a...

**which_minV:** A function to compute indices of minimum values of a distance...

cms | Man page |

colSds | Man page |

corDiss | Man page |

cSds | Man page |

e2m | Man page |

fastDist | Man page |

fastDistVV | Man page |

fastDistVVL | Man page |

fDiss | Man page |

fopls | Man page |

getPredictions | Man page |

gprCv | Man page |

gprdp | Man page |

gpr.dp | Man page |

isubset | Man page |

locFitnpred | Man page |

mbl | Man page |

mblControl | Man page |

minDissV | Man page |

movcorDist | Man page |

neigCleaning | Man page |

opls | Man page |

orthoDiss | Man page |

orthoProjection | Man page |

pcProjection | Man page |

pgpcv_cpp | Man page |

plot.mbl | Man page |

plot.orthoProjection | Man page |

plsCv | Man page |

plsProjection | Man page |

pplscv_cpp | Man page |

predgprdp | Man page |

pred.gpr.dp | Man page |

predict.orthoProjection | Man page |

predopls | Man page |

print.localOrthoDiss | Man page |

print.mbl | Man page |

print.orthoProjection | Man page |

projectpls | Man page |

resemble | Man page |

resemble-package | Man page |

sid | Man page |

simEval | Man page |

smpl | Man page |

sqrtSm | Man page |

waplswCpp | Man page |

wapls.weights | Man page |

wcolSds | Man page |

which_min | Man page |

which_minV | Man page |

inst

inst/CITATION

src

src/Makevars

src/regalg.cpp

src/movcorDist.cpp

src/RcppExports.cpp

src/which_min.cpp

src/fastDist.cpp

NAMESPACE

NEWS

R

R/plot.orthoProjection.R
R/orthoProjection.R
R/print.orthoProjection.R
R/sid.R
R/print.localOrthoDiss.R
R/getPredictions.R
R/orthoDiss.R
R/mbl.R
R/print.mbl.R
R/corDiss.R
R/resemble.R
R/plot.mbl.R
R/fDiss.R
R/RcppExports.R
R/mblControl.R
R/simEval.R
R/neigCleaning.R
R/AAA.R
README.md

MD5

DESCRIPTION

man

man/mblControl.Rd
man/gprdp.Rd
man/pgpcv_cpp.Rd
man/orthoProjection.Rd
man/predgprdp.Rd
man/waplswCpp.Rd
man/fastDist.Rd
man/locFitnpred.Rd
man/sid.Rd
man/colSds.Rd
man/cSds.Rd
man/e2m.Rd
man/getPredictions.Rd
man/fopls.Rd
man/movcorDist.Rd
man/isubset.Rd
man/minDissV.Rd
man/which_min.Rd
man/pplscv_cpp.Rd
man/cms.Rd
man/print.localOrthoDiss.Rd
man/resemble-package.Rd
man/gpr.dp.Rd
man/wapls.weights.Rd
man/opls.Rd
man/fastDistVVL.Rd
man/mbl.Rd
man/plot.mbl.Rd
man/fDiss.Rd
man/projectpls.Rd
man/fastDistVV.Rd
man/corDiss.Rd
man/smpl.Rd
man/neigCleaning.Rd
man/gprCv.Rd
man/print.orthoProjection.Rd
man/wcolSds.Rd
man/which_minV.Rd
man/predopls.Rd
man/print.mbl.Rd
man/plot.orthoProjection.Rd
man/plsCv.Rd
man/sqrtSm.Rd
man/simEval.Rd
man/pred.gpr.dp.Rd
man/orthoDiss.Rd
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