rfishbase: R Interface to 'FishBase'

A programmatic interface to <http://www.fishbase.org>, re-written based on an accompanying 'RESTful' API. Access tables describing over 30,000 species of fish, their biology, ecology, morphology, and more. This package also supports experimental access to <http://www.sealifebase.org> data, which contains nearly 200,000 species records for all types of aquatic life not covered by 'FishBase.'

Install the latest version of this package by entering the following in R:
install.packages("rfishbase")
AuthorCarl Boettiger [cre, aut], Scott Chamberlain [aut], Duncan Temple Lang [aut], Peter Wainwright [aut]
Date of publication2017-04-19 20:14:06 UTC
MaintainerCarl Boettiger <cboettig@ropensci.org>
LicenseCC0
Version2.1.2
https://github.com/ropensci/rfishbase

View on CRAN

Functions

c_code Man page
commonnames Man page
common_names Man page
common_to_sci Man page
country Man page
countrysub Man page
countrysubref Man page
diet Man page
distribution Man page
docs Man page
ecology Man page
ecosystem Man page
faoareas Man page
fecundity Man page
fishbase Man page
fooditems Man page
heartbeat Man page
introductions Man page
larvae Man page
length_freq Man page
length_length Man page
length_weight Man page
list_fields Man page
load_taxa Man page
maturity Man page
morphology Man page
morphometrics Man page
occurrence Man page
oxygen Man page
ping Man page
popchar Man page
popgrowth Man page
poplf Man page
popll Man page
poplw Man page
popqb Man page
predators Man page
ration Man page
references Man page
reproduction Man page
rfishbase Man page
rfishbase-package Man page
sci_to_common Man page
sealifebase Man page
spawning Man page
species Man page
species_fields Man page
species_info Man page
species_list Man page
speciesnames Man page
species_names Man page
speed Man page
stocks Man page
swimming Man page
synonyms Man page
validate_names Man page

Files

inst
inst/metadata
inst/metadata/species.csv
inst/examples
inst/examples/length-weight.Rmd
inst/CITATION
inst/doc
inst/doc/tutorial.R
inst/doc/tutorial.html
inst/doc/tutorial.Rmd
tests
tests/testthat.R
tests/testthat
tests/testthat/test_commonnames.R tests/testthat/test_species_list.R tests/testthat/test_sealifebase.R tests/testthat/test_endpoint.R tests/testthat/test_check_and_parse.R tests/testthat/test_heartbeat.R tests/testthat/test_species.R tests/testthat/test_docs.R tests/testthat/test_parse_name.R tests/testthat/test_load_taxa.R tests/testthat/test_morpho_physio.R tests/testthat/test_population_dynamics.R tests/testthat/test_distribution.R tests/testthat/test_synonyms.R tests/testthat/helper_rfishbase.R tests/testthat/test_maturity.R tests/testthat/test_list_fields.R tests/testthat/test_ecology.R
NAMESPACE
NEWS
data
data/fields.R
data/datalist
data/sealifebase.rda
data/fishbase.rda
R
R/morpho_physio.R R/docs.R R/synonyms.R R/heartbeat.R R/load_taxa.R R/fishbase.R R/common_names.R R/00-endpoint.R R/population_dynamics.R R/list_fields.R R/reproduction.R R/species_names.R R/distribution.R R/check_and_parse.R R/species_list.R R/trophic_ecology.R R/refs.R R/species.R
vignettes
vignettes/tutorial.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/countrysub.Rd man/reproduction.Rd man/common_to_sci.Rd man/species_fields.Rd man/length_weight.Rd man/fecundity.Rd man/heartbeat.Rd man/ecology.Rd man/fishbase.Rd man/occurrence.Rd man/length_length.Rd man/faoareas.Rd man/countrysubref.Rd man/species_names.Rd man/maturity.Rd man/ration.Rd man/swimming.Rd man/diet.Rd man/morphometrics.Rd man/popchar.Rd man/ecosystem.Rd man/stocks.Rd man/morphology.Rd man/speed.Rd man/synonyms.Rd man/country.Rd man/length_freq.Rd man/validate_names.Rd man/c_code.Rd man/rfishbase-package.Rd man/popqb.Rd man/predators.Rd man/larvae.Rd man/sealifebase.Rd man/fooditems.Rd man/distribution.Rd man/introductions.Rd man/list_fields.Rd man/species_list.Rd man/species.Rd man/load_taxa.Rd man/sci_to_common.Rd man/spawning.Rd man/docs.Rd man/oxygen.Rd man/popgrowth.Rd man/ping.Rd man/common_names.Rd man/references.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.