plot_PCA: Plot PCA results

In robustSingleCell: Robust Clustering of Single Cell RNA-Seq Data

Description

Plot the results obtained from PCA analysis as cell embedding in 2D space and annotation of gene loadings

Usage

plot_PCA(environment, quantile, order)

Arguments

environment	environment object
quantile	quantile of PCA loadings for which to define top genes driving PCs
order	ordering by which to plot the in heatmap of top genes driving PCs

robustSingleCell documentation built on May 2, 2019, 2:11 p.m.