run_tSNE: Perform tSNE Analyses

In robustSingleCell: Robust Clustering of Single Cell RNA-Seq Data

Description

Run distributed tSNE analysis for multiple input hyperparameters

Usage

run_tSNE(environment, perplexity, max_iter, rerun, local = F,
  mem = "4GB", time = "0:15:00")

Arguments

environment	environment object
perplexity	perplexity parameter of tSNE
max_iter	maximum number of iterations to run the tSNE
rerun	whether to rerun or load from cache
local	whether to run tSNE locally
mem	Memory for each job; default 4 GB
time	Time for each job; default 15 minutes

Value

Distributed job identified object

robustSingleCell documentation built on May 2, 2019, 2:11 p.m.