rptR: Repeatability Estimation for Gaussian and Non-Gaussian Data
Version 0.9.2

Estimating repeatability (intra-class correlation) from Gaussian, binary, proportion and count data.

AuthorMartin Stoffel <martin.adam.stoffel@gmail.com>, Shinichi Nakagawa <s.nakagawa@unsw.edu.au>, Holger Schielzeth <holger.schielzeth@uni-jena.de>
Date of publication2017-04-25 14:48:04 UTC
MaintainerMartin Stoffel <martin.adam.stoffel@gmail.com>
LicenseGPL (>= 2)
Version0.9.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("rptR")

Getting started

README.md
An introduction to repeatability estimation with rptR

Popular man pages

BeetlesBody: BeetlesBody dataset
bootstrap_nongaussian: Bootstrapping for non-gaussian functions (internal use)
plot.rpt: Plot a rpt object
rptBinary: GLMM-based Repeatability Estimation for Binary Data
rptPoisson: GLMM-based Repeatability Estimation for Poisson-distributed...
rptProportion: GLMM-based Repeatability Estimation for Proportion Data
with_warnings: Captures and suppresses (still to find out why) warnings of...
See all...

All man pages Function index File listing

Man pages

BeetlesBody: BeetlesBody dataset
BeetlesFemale: BeetlesFemale dataset
BeetlesMale: BeetlesMale dataset
bootstrap_nongaussian: Bootstrapping for non-gaussian functions (internal use)
group_vars: Calculates / extracts variance components from random effects...
LRT_nongaussian: Likelihood ratio test for non-gaussian functions (internal...
permut_nongaussian: Permutation function for non-gaussian functions (internal...
plot.rpt: Plot a rpt object
print.rpt: Print a rpt object
print.summary.rpt: Prints the summary of a rpt object
rpt: Repeatability Estimation for Gaussian and Non-Gaussian Data
rptBinary: GLMM-based Repeatability Estimation for Binary Data
rptGaussian: LMM-based Repeatability Estimation for Gaussian Data
rptPoisson: GLMM-based Repeatability Estimation for Poisson-distributed...
rptProportion: GLMM-based Repeatability Estimation for Proportion Data
rptR: rptR: Repeatability Estimation for Gaussian and Non-Gaussian...
summary.rpt: Summary of a rpt object
with_warnings: Captures and suppresses (still to find out why) warnings of...

Functions

Files

inst
inst/CITATION
inst/doc
inst/doc/rptR.Rmd
inst/doc/rptR.html
inst/doc/rptR.R
tests
tests/testthat.R
tests/testthat
tests/testthat/test-rpt.R
tests/testthat/test-summary.rpt.R
tests/testthat/test-rptBinary.R
tests/testthat/test-rptPoisson.R
tests/testthat/test-rptGaussian.R
tests/testthat/test-rptProportion.R
NAMESPACE
NEWS.md
data
data/BeetlesFemale.rda
data/BeetlesBody.rda
data/BeetlesMale.rda
R
R/BeetlesBody.R
R/rptBinary.R
R/internals.R
R/print.summary.rpt.R
R/plot.rpt.R
R/rptPoisson.R
R/summary.rpt.R
R/rptGaussian.R
R/rpt.R
R/print.rpt.R
R/BeetlesFemale.R
R/rptProportion.R
R/BeetlesMale.R
R/rptR.R
vignettes
vignettes/vignette_out.RData
vignettes/rptR.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/rptPoisson.Rd
man/rptGaussian.Rd
man/LRT_nongaussian.Rd
man/plot.rpt.Rd
man/rptBinary.Rd
man/rptR.Rd
man/group_vars.Rd
man/permut_nongaussian.Rd
man/BeetlesBody.Rd
man/summary.rpt.Rd
man/BeetlesFemale.Rd
man/BeetlesMale.Rd
man/print.summary.rpt.Rd
man/print.rpt.Rd
man/rpt.Rd
man/with_warnings.Rd
man/bootstrap_nongaussian.Rd
man/rptProportion.Rd
rptR documentation built on May 19, 2017, 9:06 p.m.

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