plot.rpt: Plot a rpt object

In rptR: Repeatability Estimation for Gaussian and Non-Gaussian Data

Plot a rpt object

Description

Plots the distribution of repeatability estimates from bootstrapping and permutation tests.

Usage

## S3 method for class 'rpt'
plot(
  x,
  grname = names(x$ngroups),
  scale = c("link", "original"),
  type = c("boot", "permut"),
  main = NULL,
  breaks = "FD",
  xlab = NULL,
  ...
)

Arguments

x	An rpt object returned from one of the rpt functions.
grname	The name of the grouping factor to plot.
scale	Either "link" or "original" scale results for results of non-Gaussian functions.
type	Either "boot" or "permut" for plotting the results of bootstraps or permutations.
main	Plot title
breaks	hist() argument
xlab	x-axis title
...	Additional arguments to the hist() function for customized plotting.

Value

A histogram of the distribution of bootstrapping or permutation test estimates of the repeatability including a confidence interval (CI).

Author(s)

Holger Schielzeth ([e-mail]), Shinichi Nakagawa ([e-mail]), Martin Stoffel ([e-mail])

References

Nakagawa, S. & Schielzeth, H. (2010) Repeatability for Gaussian and non-Gaussian data: a practical guide for biologists. Biological Reviews 85: 935-956

rptR documentation built on June 8, 2025, 10:22 a.m.