permut_nongaussian: Permutation function for non-gaussian functions (internal...

Description Usage Arguments

Description

Permutation function for non-gaussian functions (internal use)

Usage

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permut_nongaussian(permut, R_pe, formula, data, dep_var, grname, npermut,
  parallel, ncores, link, family, R, rptObj, update)

Arguments

permut

permutation function which permutes residuals and calculates R

R_pe

Function to estimate Repeatabilities and Variances for grouping factors, Residuals, Overdispersion and Fixed effects.

formula

lme4 model formula

data

data.frame given as original input

dep_var

original response variable

grname

original grnames vector without Residual or Fixed

npermut

number of permutations

parallel

boolean

ncores

number of cores specified, defaults to NULL

link

link function

family

respnse family (so far just binomial or poisson)

R

point estimate to concetenate with permutations


rptR documentation built on May 2, 2019, 10:36 a.m.