Nothing
context("testing all print methods")
test_that(paste(
"print.stansim_simulation function should print",
"expected output"), {
## read in test stansim_simulation obj to print
extract_test_data <- readRDS("objects/test_stansim.rds")
caught_print <- utils::capture.output(print(extract_test_data))
expect_true(grepl("Stan Simulation Title: .*", caught_print[1]))
expect_true(grepl("Model Name: .*", caught_print[2]))
expect_true(grepl("", caught_print[3]))
expect_true(grepl("Started Running at: .*", caught_print[4]))
expect_true(grepl("Finished Running at: .*", caught_print[5]))
expect_true(grepl("", caught_print[6]))
expect_true(grepl("Number of Models Fitted: \\d*", caught_print[7]))
expect_true(grepl("", caught_print[8]))
expect_true(grepl("Parameters Recorded: \\d*", caught_print[9]))
expect_true(grepl(
"eta\\[1\\] eta\\[2\\] eta\\[3\\] eta\\[4\\] eta\\[5\\] ",
caught_print[10]))
expect_true(grepl(
"eta\\[6\\] eta\\[7\\] eta\\[8\\] lp__ mu ",
caught_print[11]))
expect_true(grepl(
"tau theta\\[1\\] theta\\[2\\] theta\\[3\\] theta\\[4\\]",
caught_print[12]))
expect_true(grepl(
"theta\\[5\\] theta\\[6\\] theta\\[7\\] theta\\[8\\] ",
caught_print[13]))
expect_true(grepl("", caught_print[14]))
expect_true(grepl("Estimates Recorded: \\d*", caught_print[15]))
expect_true(grepl(
"2.5% 25% 50% 75% 97.5% ",
caught_print[16]))
expect_true(grepl(
"mean n_eff Rhat sd se_mean",
caught_print[17]))
})
test_that(
"print.stansim_simulation works with > 50 estimates and parameters", {
## read in test stansim_simulation obj to print
extract_test_data <- readRDS("objects/test_stansim.rds")
# add > 50 estimates to data
temp_data <- extract_test_data$data
temp_data <- rbind(temp_data,
cbind("dataset" = NA,
"parameter" = 1:50,
"estimate" = 1:50,
"value" = NA))
# put back in to stansim_simulation object
extract_test_data$data <- temp_data
caught_print <-
utils::capture.output(print(extract_test_data))
expect_true(grepl("Stan Simulation Title: .*", caught_print[1]))
expect_true(grepl("Model Name: .*", caught_print[2]))
expect_true(grepl("", caught_print[3]))
expect_true(grepl("Started Running at: .*", caught_print[4]))
expect_true(grepl("Finished Running at: .*", caught_print[5]))
expect_true(grepl("", caught_print[6]))
expect_true(grepl("Number of Models Fitted: \\d*", caught_print[7]))
expect_true(grepl("", caught_print[8]))
expect_true(grepl("Parameters Recorded: \\d* \\(first 50 shown\\)",
caught_print[9]))
expect_true(grepl(
"eta\\[1\\] eta\\[2\\] eta\\[3\\] eta\\[4\\] eta\\[5\\] ",
caught_print[10]))
expect_true(grepl(
"eta\\[6\\] eta\\[7\\] eta\\[8\\] lp__ mu ",
caught_print[11]))
expect_true(grepl(
"tau theta\\[1\\] theta\\[2\\] theta\\[3\\] theta\\[4\\]",
caught_print[12]))
expect_true(grepl(
"theta\\[5\\] theta\\[6\\] theta\\[7\\] theta\\[8\\] 1 ",
caught_print[13]))
expect_true(grepl(
"2 3 4 5 6 ",
caught_print[14]))
expect_true(grepl(
"7 8 9 10 11 ",
caught_print[15]))
expect_true(grepl(
"12 13 14 15 16 ",
caught_print[16]))
expect_true(grepl(
"17 18 19 20 21 ",
caught_print[17]))
expect_true(grepl(
"22 23 24 25 26 ",
caught_print[18]))
expect_true(grepl(
"27 28 29 30 31 ",
caught_print[19]))
expect_true(grepl("", caught_print[20]))
expect_true(grepl("Estimates Recorded: \\d* \\(first 50 shown\\)",
caught_print[21]))
expect_true(grepl(
"2.5% 25% 50% 75% 97.5% ",
caught_print[22]))
expect_true(grepl(
"mean n_eff Rhat sd se_mean",
caught_print[23]))
expect_true(grepl(
"1 2 3 4 5 ",
caught_print[24]))
expect_true(grepl(
"6 7 8 9 10 ",
caught_print[25]))
expect_true(grepl(
"11 12 13 14 15 ",
caught_print[26]))
expect_true(grepl(
"16 17 18 19 20 ",
caught_print[27]))
expect_true(grepl(
"21 22 23 24 25 ",
caught_print[28]))
expect_true(grepl(
"26 27 28 29 30 ",
caught_print[29]))
expect_true(grepl(
"31 32 33 34 35 ",
caught_print[30]))
expect_true(grepl(
"36 37 38 39 40 ",
caught_print[31]))
})
test_that(paste(
"print.stansim_collection function should print",
"expected output"), {
## read in test stansim obj to extract from
extract_test_data <-
readRDS("objects/collection_for_method_tests.rds")
caught_print <- utils::capture.output(print(extract_test_data))
expect_true(grepl("Stansim Collection Title: .*", caught_print[1]))
expect_true(grepl("", caught_print[2]))
expect_true(grepl("Simulations Collected: \\d*", caught_print[3]))
expect_true(grepl(" Stansim_.*", caught_print[4]))
expect_true(grepl(" refitted test sim", caught_print[5]))
expect_true(grepl("", caught_print[6]))
expect_true(grepl("Datasets Refitted: \\d*", caught_print[7]))
expect_true(grepl(" *sim_name *dataset", caught_print[8]))
expect_true(grepl(" refitted test sim data-raw/data/schoolsdat1.rds", caught_print[9]))
expect_true(grepl(" refitted test sim data-raw/data/schoolsdat3.rds", caught_print[10]))
})
test_that(paste(
"print.stansim_data function should print",
"expected output"), {
## read in test stansim obj to extract from
extract_test_data <-
readRDS("objects/stansim_data_for_method_tests.rds")
caught_print <- utils::capture.output(print(extract_test_data))
expect_true(grepl("Stansim Data Title: .*", caught_print[1]))
expect_true(grepl("Number of datasets simulated: \\d*", caught_print[2]))
expect_true(grepl("", caught_print[3]))
expect_true(grepl("Simulated from model: .*", caught_print[4]))
})
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