Nothing
context("LBA race functions: Input")
test_that("n1PDF: List input for A and b", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2])
p1 <- n1PDF(r_lba$rt, A=A[1], b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE) # PDF
p2 <- n1PDF(r_lba$rt, A=list(A[1], A[1]), b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p2, p1)
p3 <- n1PDF(r_lba$rt, A=A[1], b=list(b[1], b[1]), t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p3, p1)
p4 <- n1PDF(r_lba$rt, A=list(A[1], A[1]), b=list(b[1], b[1]), t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p4, p1)
p5 <- n1PDF(r_lba$rt, A=rep(A[1], 13), b=list(rep(b[1], 13), rep(b[1], 5)) ,
t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p5, p1)
p6_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=A[1], b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE)
p6_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=A[2], b=b[2],
t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE)
p7 <- n1PDF(r_lba$rt, A=rep(A, each = samples/2), b=rep(b, each = samples/2),
t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE)
expect_identical(c(p6_a, p6_b), p7)
p6x <- n1PDF(r_lba$rt, A=A[1], b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
p7x <- n1PDF(r_lba$rt, A=list(A[1], A[1]), b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
expect_equal(p7x, p6x)
p8x <- n1PDF(r_lba$rt, A=A[1], b=list(b[1], b[1]), t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
expect_equal(p8x, p6x)
p9x <- n1PDF(r_lba$rt, A=list(A[1], A[1]), b=list(b[1], b[1]),
t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2,
silent = TRUE) # PDF
expect_equal(p9x, p6x)
p10x <- n1PDF(r_lba$rt, A=rep(A[1], 13), b=list(rep(b[1], 13), rep(b[1], 5)),
t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2,
silent = TRUE) # PDF
expect_equal(p10x, p9x)
})
test_that("n1PDF: List and trialwise input for A and b", {
samples <- 2
A <- runif(4, 0.3, 0.9)
b <- A+runif(4, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2])
p1 <- n1PDF(r_lba$rt, A=list(A[1:2],A[3:4]),
b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE)
p2 <- n1PDF(r_lba$rt[1], A=list(A[1],A[3]),
b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE)
p3 <- n1PDF(r_lba$rt[2], A=list(A[2],A[4]),
b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE)
expect_equal(p1, c(p2, p3))
pb1 <- n1PDF(r_lba$rt, A=A[1:2],
b=list(b[1:2],b[3:4]),
t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE)
pb2 <- n1PDF(r_lba$rt[1], A=A[1],
b=list(b[1],b[3]),
t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE)
pb3 <- n1PDF(r_lba$rt[2], A=A[2],
b = list(b[2],b[4]),
t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2], silent = TRUE)
expect_equal(pb1, c(pb2, pb3))
})
test_that("n1CDF: List input for A and b", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2])
p1 <- n1CDF(r_lba$rt, A=A[1], b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
p2 <- n1CDF(r_lba$rt, A=list(A[1], A[1]), b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p2, p1)
p3 <- n1CDF(r_lba$rt, A=A[1], b=list(b[1], b[1]), t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p3, p1)
p4 <- n1CDF(r_lba$rt, A=list(A[1], A[1]), b=list(b[1], b[1]), t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p4, p1)
p5 <- n1CDF(r_lba$rt, A=rep(A[1], 13), b=list(rep(b[1], 13), rep(b[1], 5)),
t0 = t0[1], mean_v=v1[1:2], sd_v=v2[1:2], silent = TRUE) # PDF
expect_equal(p5, p1)
p6 <- n1CDF(r_lba$rt, A=A[1], b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
p7 <- n1CDF(r_lba$rt, A=list(A[1], A[1]), b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
expect_equal(p7, p6)
p8 <- n1CDF(r_lba$rt, A=A[1], b=list(b[1], b[1]), t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
expect_equal(p8, p6)
p9 <- n1CDF(r_lba$rt, A=list(A[1], A[1]), b=list(b[1], b[1]), t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
expect_equal(p9, p6)
p10 <- n1CDF(r_lba$rt, A=rep(A[1], 13), b=list(rep(b[1], 13), rep(b[1], 5)),
t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = 0.2, silent = TRUE) # PDF
expect_equal(p10, p9)
})
test_that("n1CDF: List input for drift rate", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2])
v1 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = 0.5, mean_v=c(1.2, 1.0), sd_v=0.2)
v2 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = 0.5, mean_v=list(1.2, 1.0), sd_v=0.2)
expect_identical(v1, v2)
})
test_that("n1CDF: Trialwise input for drift rate", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
rts <- sample(seq(0.5, 2, length.out = samples))
v1_a <- n1CDF(rts[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0), sd_v=0.2)
v1_b <- n1CDF(rts[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5), sd_v=0.5)
v2 <- n1CDF(rts, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)))
expect_identical(c(v1_a, v1_b), v2)
v3_a <- n1CDF(rts[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0, 0.6), sd_v=0.2)
v3_b <- n1CDF(rts[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5, 1.2), sd_v=0.5)
v4 <- n1CDF(rts, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50),
rep(c(0.6, 1.2), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)))
expect_identical(c(v3_a, v3_b), v4)
v5_a <- n1CDF(rts[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0), sd_v=0.2, st0 = 0.2)
v5_b <- n1CDF(rts[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5), sd_v=0.5, st0 = 0.2)
v6 <- n1CDF(rts, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)), st0 = 0.2)
expect_identical(c(v5_a, v5_b), v6)
v7_a <- n1CDF(rts[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0, 0.6), sd_v=0.2, st0 = 0.2)
v7_b <- n1CDF(rts[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5, 1.2), sd_v=0.5, st0 = 0.2)
v8 <- n1CDF(rts, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50),
rep(c(0.6, 1.2), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)), st0 = 0.2)
expect_identical(c(v7_a, v7_b), v8)
})
test_that("n1PDF: Trialwise input for t0", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1], mean_v=v1[1:2],
sd_v=v2[1:2])
v1_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0), sd_v=0.2)
v1_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.2,
mean_v=c(1.2, 1.0), sd_v=0.2)
v2 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = rep(c(0.5, 0.2), each = 50),
mean_v=c(1.2, 1.0), sd_v=0.2)
expect_identical(c(v1_a, v1_b), v2)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.5, 1.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1],
shape_v =v1[1:2], scale_v = v2[1:2], distribution = "gamma")
v3_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
shape_v=v1[3:4], scale_v = v2[3:4], distribution = "gamma")
v3_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.2,
shape_v=v1[3:4], scale_v = v2[3:4], distribution = "gamma")
v3 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = rep(c(0.5, 0.2), each = 50),
shape_v=v1[3:4], scale_v = v2[3:4], distribution = "gamma")
expect_identical(c(v3_a, v3_b), v3)
})
test_that("n1PDF: Trialwise input for st0", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(2, 0.1, 0.2)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2], st0 = st0[1])
v1_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0), sd_v=0.2, st0 = st0[1])
v1_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.2,
mean_v=c(1.2, 1.0), sd_v=0.2, st0 = st0[2])
v2 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = rep(c(0.5, 0.2), each = 50),
mean_v=c(1.2, 1.0), sd_v=0.2, st0 = rep(st0, each = 50))
expect_identical(c(v1_a, v1_b), v2)
})
test_that("n1PDF: Trialwise input for drift rate", {
samples <- 100
A <- runif(2, 0.3, 0.9)
b <- A+runif(2, 0, 0.5)
t0 <- runif(2, 0.1, 0.7)
v1 <- runif(4, 0.5, 1.5)
v2 <- runif(4, 0.1, 0.5)
st0 <- runif(1, 0.1, 0.5)
r_lba <- rLBA(samples, A=A[1], b=b[1], t0 = t0[1],
mean_v=v1[1:2], sd_v=v2[1:2])
v1_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0), sd_v=0.2)
v1_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5), sd_v=0.5)
v2 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)))
expect_identical(c(v1_a, v1_b), v2)
v3_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0, 0.6), sd_v=0.2)
v3_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5, 1.2), sd_v=0.5)
v4 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50),
rep(c(0.6, 1.2), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)))
expect_identical(c(v3_a, v3_b), v4)
v5_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0), sd_v=0.2, st0 = 0.2)
v5_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5), sd_v=0.5, st0 = 0.2)
v6 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)), st0 = 0.2)
expect_identical(c(v5_a, v5_b), v6)
v7_a <- n1PDF(r_lba$rt[seq_len(samples/2)], A=0.5, b=1, t0 = 0.5,
mean_v=c(1.2, 1.0, 0.6), sd_v=0.2, st0 = 0.2)
v7_b <- n1PDF(r_lba$rt[seq_len(samples/2)+samples/2], A=0.5, b=1, t0 = 0.5,
mean_v=c(2.2, 0.5, 1.2), sd_v=0.5, st0 = 0.2)
v8 <- n1PDF(r_lba$rt, A=0.5, b=1, t0 = 0.5,
mean_v=list(rep(c(1.2, 2.2), each = 50),
rep(c(1.0, 0.5), each = 50),
rep(c(0.6, 1.2), each = 50)),
sd_v=list(rep(c(0.2, 0.5), each = 50)), st0 = 0.2)
expect_identical(c(v7_a, v7_b), v8)
})
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