annotation_variant: Create variant annotations for A3

In rtemis.a3: Amino Acid Annotation (A3) Format

Create variant annotations for A3

Description

Creates an A3Variant object for variant annotations with position and info.

Usage

annotation_variant(x, info = list())

Arguments

x	Integer scalar: Position of the variant (1-based indexing).
info	Named list: Additional information about the variant (e.g. reference and alternate amino acids, variant type, etc.)

Value

A3Variant object

Author(s)

EDG

Examples

# Create a variant annotation for position 10 with info about the variant
annotation_variant(10L, info = list(ref = "A", alt = "T", type = "missense"))

rtemis.a3 documentation built on April 29, 2026, 1:06 a.m.