Man pages for scNPM
Single-Cell Network Propensity Matching
| cell | Cell-Level Metadata (AMD Example Data) |
| cols_to_MR | Column Indices of MR Cells (AMD Example Data) |
| cols_to_PR | Column Indices of PR Cells (AMD Example Data) |
| compute_qf_smd | Compute the SMD of the Network Quadratic Form for Matched... |
| goal_gene | Target Gene Names (AMD Example Data) |
| goal_gene_mt | Top-50 Gene Expression Matrix (AMD Example Data) |
| mt | Full Gene Expression Matrix (AMD Example Data) |
| plot_diff_network | Plot Differential Gene Regulatory Network (Combined/Separate... |
| plot_group_network | Plot a Selected Group Network |
| plot_network_core | Core Network Plotting Function |
| run_scNPM | Run Single-Cell Network Propensity Matching (scNPM) |
| scNPM-package | Single-Cell Network Propensity Matching |
| select_differential_edges | Select Differential Edges by Posterior Directional Error |
| select_group_edges | Select Group Networks by Posterior Expected False Discovery... |
