mt: Full Gene Expression Matrix (AMD Example Data)

In scNPM: Single-Cell Network Propensity Matching

Full Gene Expression Matrix (AMD Example Data)

Description

Sparse UMI count matrix (all detected genes x cells) from which the top-50 target gene matrix goal_gene_mt was extracted. Provided so users can derive alternative gene subsets. This object covers the same 400 cells as goal_gene_mt; genes detected in fewer than 3 of these cells were removed.

Usage

data(top50_goal_gene_mt)

Format

A dgTMatrix with 12530 rows (genes) and 400 columns (cells); entries are raw UMI counts.

Source

Derived from a public single-cell RNA-seq study of human retinas (see the scNPM reference publication).

scNPM documentation built on Oct. 19, 2026, 5:10 p.m.