|hierarchicalClones||Hierarchical clustering method for clonal partitioning|
|identicalClones||Sequence identity method for clonal partitioning|
|plotCloneSummary||Plot clonal clustering summary|
|scoper||The SCOPer package|
|ScoperClones-class||S4 class containing clonal assignments and summary data|
|scoper-package||scoper: Spectral Clustering-Based Method for Identifying B...|
|spectralClones||Spectral clustering method for clonal partitioning|
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