scregclust: Reconstructing the Regulatory Programs of Target Genes in scRNA-Seq Data

Implementation of the scregclust algorithm described in Larsson, Held, et al. (2024) <doi:10.1038/s41467-024-53954-3> which reconstructs regulatory programs of target genes in scRNA-seq data. Target genes are clustered into modules and each module is associated with a linear model describing the regulatory program.

Package details

AuthorFelix Held [aut, cre] (ORCID: <https://orcid.org/0000-0002-7679-7752>), Ida Larsson [aut] (ORCID: <https://orcid.org/0000-0001-5422-4243>), Sven Nelander [aut] (ORCID: <https://orcid.org/0000-0003-1758-1262>), André Armatowski [ctb]
MaintainerFelix Held <felix.held@gmail.com>
LicenseGPL (>= 3)
Version0.2.3
URL https://scmethods.github.io/scregclust/ https://github.com/scmethods/scregclust/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("scregclust")

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scregclust documentation built on April 5, 2026, 5:06 p.m.