scregclust-package: scregclust: Reconstructing the Regulatory Programs of Target...

In scregclust: Reconstructing the Regulatory Programs of Target Genes in scRNA-Seq Data

scregclust: Reconstructing the Regulatory Programs of Target Genes in scRNA-Seq Data

Description

Implementation of the scregclust algorithm described in Larsson, Held, et al. (2024) \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1038/s41467-024-53954-3")} which reconstructs regulatory programs of target genes in scRNA-seq data. Target genes are clustered into modules and each module is associated with a linear model describing the regulatory program.

Details

Computational methods for the scregclust algorithm

Author(s)

Ida Larsson, Felix Held, Sven Nelander

See Also

Useful links:

• https://scmethods.github.io/scregclust/

• https://github.com/scmethods/scregclust/

• Report bugs at https://github.com/scmethods/scregclust/issues

scregclust documentation built on April 4, 2025, 3:03 a.m.