Chrom: The Chromosome class

Description Details Slots Author(s)

Description

This is a S4 Chrom classs for a single chromosome

Details

This Chrom class abstracts the information for all the markers on a single chromosome. It has the following slots.

Slots

Chromosome:

A character string as the chromosome name or index.

Name:

A character vector containing the names for all the markers on this chromosome.

Position:

A numeric vector containing the positions of all the markers on this chromosome.

Maf:

A numeric vector containing the minor allele frequencies of all the markers on this chromosome.

Type:

A character vector containing the types for all the markers on this chromosome.

Status:

An integer vector containing the statuses for all the markers on this chromosome.

Author(s)

Nick X-L Wu


selectSNPs documentation built on Feb. 28, 2020, 5:08 p.m.