synsequence: Random synonymous coding sequence generation

Description

Generates a random synonymous coding sequence, according to a certain codon usage bias

Usage

1

Arguments

sequence

A nucleic acids sequence

numcode

The genetic code number as in translate

ucoweight

A list of weights containing the desired codon usage bias as generated by ucoweight

Value

a sequence translating to the same protein sequence as the original one (cf. translate), but containing synonymous codons

Author(s)

L. Palmeira

References

citation("seqinr")

See Also

ucoweight

Examples

1
2
3

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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