bs_filter: bs_filter
In seqmagick: Sequence Manipulation Utilities
bs_filter R Documentation
bs_filter
Description
biological sequence filter by searching pattern
Usage
bs_filter(x, pattern, by = "description", ignore.case = FALSE)
Arguments
x
BStringSet object
pattern
keyword for filter
by
one of 'description' and 'sequence'
ignore.case
logical
Value
BStringSet object
Author(s)
Guangchuang Yu
Examples
fa_file <- system.file("extdata/HA.fas", package="seqmagick")
x <- fa_read(fa_file)
bs_filter(x, 'ATGAAAGTAAAA', by='sequence')
seqmagick documentation built on July 9, 2023, 7:36 p.m.
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| bs_filter | R Documentation |
bs_filter
Description
biological sequence filter by searching pattern
Usage
bs_filter(x, pattern, by = "description", ignore.case = FALSE)
Arguments
x |
BStringSet object |
pattern |
keyword for filter |
by |
one of 'description' and 'sequence' |
ignore.case |
logical |
Value
BStringSet object
Author(s)
Guangchuang Yu
Examples
fa_file <- system.file("extdata/HA.fas", package="seqmagick")
x <- fa_read(fa_file)
bs_filter(x, 'ATGAAAGTAAAA', by='sequence')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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