fa_write: fa_write
In seqmagick: Sequence Manipulation Utilities
fa_write R Documentation
fa_write
Description
write fasta file
Usage
fa_write(x, outfile, type = "interleaved")
Arguments
x
XStringSet object
outfile
output file
type
one of interleaved and sequential
Value
None
Author(s)
Guangchuang Yu
References
http://evolution.genetics.washington.edu/phylip/doc/sequence.html
Examples
phy_file <- system.file("extdata/HA.phy", package="seqmagick")
x <- phy_read(phy_file)
fa_file <- tempfile(fileext = '.fas')
fa_write(x, fa_file)
seqmagick documentation built on July 9, 2023, 7:36 p.m.
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| fa_write | R Documentation |
fa_write
Description
write fasta file
Usage
fa_write(x, outfile, type = "interleaved")
Arguments
x |
XStringSet object |
outfile |
output file |
type |
one of interleaved and sequential |
Value
None
Author(s)
Guangchuang Yu
References
http://evolution.genetics.washington.edu/phylip/doc/sequence.html
Examples
phy_file <- system.file("extdata/HA.phy", package="seqmagick")
x <- phy_read(phy_file)
fa_file <- tempfile(fileext = '.fas')
fa_write(x, fa_file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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