simuData: Simulated Data for group PLS-DA model

In sgPLS: Sparse Group Partial Least Square Methods

Simulated Data for group PLS-DA model

Description

This simulated data set contains the expression of 1000 genes for 4 clusters from 48 different individuals.

Usage

data(simuData)

Format

A list containing the following components:

X

data matrix with 48 rows and 1000 columns. Each row represents an experimental sample, and each column a single gene.

Y

a factor variable indicating the cluster of each subject

Details

This data have been simulated such that only 6 groups of 100 genes are linked to the 4 clusters. The others 4 groups of 100 genes has been added to represent some noise. The relevant groups are the group 1,2,4,6,7 and 9. The groups 3,5,8, and 10 are noise groups.

sgPLS documentation built on Oct. 5, 2023, 5:06 p.m.