Description Usage Arguments Value Examples
Calculate FDR-adjusted p-values.
1 | call_fdr(whole_re, thres_tr = 10, method = 'BH')
|
whole_re |
A list of the objects obtained from sharpr2 for each chromosome. |
thres_tr |
The threshold for the size of tiled reigons used for calculate FDR-adjusted p-values. The default value is 10. |
method |
The method for calculating FDR-adjusted p-values. See the function 'p.adjust' for more details abount the method. The default is 'BH'. |
gfdr: a result table (data.frame) containing FDR-adjusted p-values, chromosome, region, the size and the index of the tiled region it is located.
1 2 3 |
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