Oyster_incr_area: Area between shell increments

In shelltrace: Bivalve Growth and Trace Element Accumulation Model

Description

Calculates the area between this shell increment and the previous increment and the cumulative shell cross section area at the moment of deposition of the current increment and adds these to the previously created increment matrix. de Winter, N. J. (2017) <doi:10.5194/gmd-2017-137>

Usage

Oyster_incr_area(cross_section, incr_matrix)

Arguments

cross_section	Digitized cross section of the shell with shell top, bottom and growth increments relative to a common X-axis
incr_matrix	Matrix containing ages and calibrated ages for each shell increment

Details

Areas between shell increments are calculated by iterating through increments in X-direction (dx) and adding differences in Y-values between increments

Value

incr_matrix

Matrix containing ages and calibrated ages for each shell increment

Note

Please cite Geoscientific Model Development paper dealing with the ShellTrace model

Author(s)

Niels J. de Winter

Source

GitHub
Manuscript
Supplementary data
Author website

References

de Winter, N. J.: ShellTrace v1.0 ? A new approach for modelling growth and trace element uptake in marine bivalve shells: Model verification on pacific oyster shells (Crassostrea gigas), Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2017-137, in review, 2017.

Examples

  incr_matrix1<-Oyster_incr_area(cross_section, incr_matrix0)

shelltrace documentation built on May 2, 2019, 2:25 a.m.