Description Usage Arguments Details Value Note Author(s) Source References Examples
View source: R/Oyster_plot_incr_CS.R
Formula that plots the result of the interpolation of digitized shell growth increments to reconstruct sub-increments to provide a check on the progress of the model. de Winter, N. J. (2017) <doi:10.5194/gmd-2017-137>
1 | Oyster_plot_incr_CS(IncG, incr_matrix, Tstep)
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IncG |
Matrix of X- and Y-coordinates of all interpolated sub-increments |
incr_matrix |
Matrix listing characteristics of each digitized increment |
Tstep |
The step size (dt) in time (days) used to interpolate the existing shell increments |
In order to prevent overcrowding the plot area and slowing the plotting process, only original shell increments and sub-increments halfway between original increments are plotted. Sub-increments are colored blue
No data is exported, but a plot showing interpolated sub-increments is given in a separate window.
Please cite Geoscientific Model Development paper dealing with the ShellTrace model
Niels J. de Winter
GitHub
Manuscript
Supplementary data
Author website
de Winter, N. J.: ShellTrace v1.0 - A new approach for modelling growth and trace element uptake in marine bivalve shells: Model verification on pacific oyster shells (Crassostrea gigas), Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2017-137, in review, 2017.
1 | Oyster_plot_incr_CS(IncG,incr_matrix3,Tstep=1)
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