summary.list.simode: Summary method for 'list.simode' objects

In simode: Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching

Description

Summary method for list.simode objects

Usage

## S3 method for class 'list.simode'
summary(
  object,
  sum_mean_sd = FALSE,
  pars_true = NULL,
  digits = max(3, getOption("digits") - 3),
  ...
)

Arguments

object	list.simode object returned by a call to simode with obs_sets>1
sum_mean_sd	Whether to calculate mean and standard deviation for the parameter estimates in the fits included in the given object. To be used when object is the result of fitting monte-carlo simulations.
pars_true	The true parameter values (relevant only for when sum_mean_sd=TRUE). When given, the summary will also include the bias and RMSE for each parameter estimate.
digits	The number of significant digits to use.
...	Additional argument(s) for methods.

Value

The mean and standard deviation for the loss values and parameter estimates obtained from the integral-matching and nonlinear least squares optimizations. If pars_true is given, then will also calculate bias and RMSE for the parameter estimates.

simode documentation built on July 1, 2020, 10:30 p.m.