base_line_multi_traits | Calculate genetic value based on QTN objects. |
base_line_single_trait | Calculate genetic value based on QTN objects. |
constraint | Select SNPs to be assigned as QTNs: To be included LD, FST |
create_phenotypes | Simulation of single/multiple traits under different models... |
file_loader | Function used by create_phenotypes to load marker dataset. |
genetic_effect | Calculate genetic value based on QTN objects. |
genotypes | Generate a numeric (dosage) HapMap file |
make_pd | obtain a positive definite matrix |
numericalization | Converts character SNP genotype to numerical (-1, 0, 1) were... |
phenotypes | Generate environmental effects based on a given heritability |
qtn_from_user | Select SNPs to be assigned as QTNs |
qtn_linkage | Select SNPs to be assigned as QTNs |
qtn_partially_pleiotropic | Select SNPs to be assigned as QTNs |
qtn_pleiotropic | Select SNPs to be assigned as QTNs. |
SNP55K_maize282_maf04 | Genotypic data for 282 inbred association panel using the 55K... |
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