smoothSurv: Survival Regression with Smoothed Error Distribution

Contains, as a main contribution, a function to fit a regression model with possibly right, left or interval censored observations and with the error distribution expressed as a mixture of G-splines. Core part of the computation is done in compiled C++ written using the Scythe Statistical Library Version 0.3.

Author
Arnošt Komárek <arnost.komarek@mff.cuni.cz>
Date of publication
2015-07-27 23:57:23
Maintainer
Arnošt Komárek <arnost.komarek@mff.cuni.cz>
License
GPL (>= 2)
Version
1.6
URLs

View on CRAN

Man pages

a2c
Work Function for 'smoothSurvReg'
c2a
Work Function for 'smoothSurvReg'
confint.smoothSurvReg
Confidence Intervals for Regression Parameters of...
derivative.cc3
Work Function for 'smoothSurvReg', currently nowhere used
derivative.expAD
Work Function for 'smoothSurvReg', currently nowhere used
dextreme
Density of the Extreme Value Distribution of a Minimum.
dstlogis
Density of Standardized Logistic Distribution.
estimTdiff
Estimate expectation of survival times and their difference...
eval.Gspline
Evaluate a G-spline in a grid of values
fdensity.smoothSurvReg
Density for Objects of Class 'smoothSurvReg'
find.c
Work Function for 'smoothSurvReg'
give.c
Work Function for 'smoothSurvReg'
hazard.smoothSurvReg
Hazard Curves for Objects of Class 'smoothSurvReg'
minPenalty
Minimize the penalty term under the two (mean and variance)...
MP.pseudoinv
Work Function for 'smoothSurvReg', currently nowhere used.
piece
Left Continuous Piecewise Constant Function with a Finite...
plot.smoothSurvReg
Plot Objects of Class 'smoothSurvReg'
print.estimTdiff
Print for Objects of Class 'estimTdiff'
print.smoothSurvReg
Summary and Print for Objects of Class 'smoothSurvReg'
residuals.smoothSurvReg
Residuals for Objects of Class 'smoothSurvReg'
smoothSurvReg
Regression for a Survival Model with Smoothed Error...
smoothSurvReg.control
More Options for 'smoothSurvReg'
smoothSurvReg.fit
Work Function to Fit the Model Using 'smoothSurvReg'
smoothSurvReg.object
Smoothed Survival Regression Object
std.data
Standardization of the Data
survfit.smoothSurvReg
Survivor Curves for Objects of Class 'smoothSurvReg'

Files in this package

smoothSurv
smoothSurv/inst
smoothSurv/inst/CITATION
smoothSurv/inst/doc
smoothSurv/inst/doc/wihs.tar.gz
smoothSurv/inst/doc/tandmobiel.tar.gz
smoothSurv/src
smoothSurv/src/convertCAD.h
smoothSurv/src/Scythe_Stat.h
smoothSurv/src/convertCAD.cpp
smoothSurv/src/Scythe_Util.h
smoothSurv/src/difference.h
smoothSurv/src/Scythe_LA.cpp
smoothSurv/src/penalLogLik.cpp
smoothSurv/src/Scythe_Matrix.h
smoothSurv/src/difference.cpp
smoothSurv/src/Scythe_Matrix_Iterator.h
smoothSurv/src/createPosDef.h
smoothSurv/src/AKmatrix.h
smoothSurv/src/Scythe_IDE.cpp
smoothSurv/src/AKmatrix.cpp
smoothSurv/src/penalLogLik.h
smoothSurv/src/linpackFORT.cpp
smoothSurv/src/Scythe_LA.h
smoothSurv/src/eispackFORT.h
smoothSurv/src/solve.QP.compact.h
smoothSurv/src/smoothSurvReg84.h
smoothSurv/src/Scythe_Math.h
smoothSurv/src/linpackFORT.h
smoothSurv/src/solve.QP.compact.cpp
smoothSurv/src/Scythe_IDE.h
smoothSurv/src/eispackFORT.cpp
smoothSurv/src/Scythe_Math.cpp
smoothSurv/src/Scythe_Error.h
smoothSurv/src/smoothSurvReg84.cpp
smoothSurv/src/gauss.h
smoothSurv/src/createPosDef.cpp
smoothSurv/src/Scythe_Stat.cpp
smoothSurv/src/gauss.cpp
smoothSurv/src/Scythe_Matrix.cpp
smoothSurv/NAMESPACE
smoothSurv/NEWS
smoothSurv/R
smoothSurv/R/smoothSurvReg.control.R
smoothSurv/R/survfit.smoothSurvReg.R
smoothSurv/R/estimTdiff.R
smoothSurv/R/minPenalty.R
smoothSurv/R/fdensity.smoothSurvReg.R
smoothSurv/R/confint.smoothSurvReg.R
smoothSurv/R/hazard.smoothSurvReg.R
smoothSurv/R/summary.smoothSurvReg.R
smoothSurv/R/std.data.R
smoothSurv/R/print.smoothSurvReg.R
smoothSurv/R/smoothSurvReg.R
smoothSurv/R/smoothSurvReg.fit.R
smoothSurv/R/eval.Gspline.R
smoothSurv/R/convertCDA.R
smoothSurv/R/print.estimTdiff.R
smoothSurv/R/zzz.R
smoothSurv/R/residuals.smoothSurvReg.R
smoothSurv/R/plot.smoothSurvReg.R
smoothSurv/MD5
smoothSurv/DESCRIPTION
smoothSurv/man
smoothSurv/man/print.estimTdiff.Rd
smoothSurv/man/print.smoothSurvReg.Rd
smoothSurv/man/give.c.Rd
smoothSurv/man/smoothSurvReg.object.Rd
smoothSurv/man/dstlogis.Rd
smoothSurv/man/piece.Rd
smoothSurv/man/smoothSurvReg.control.Rd
smoothSurv/man/fdensity.smoothSurvReg.Rd
smoothSurv/man/a2c.Rd
smoothSurv/man/smoothSurvReg.Rd
smoothSurv/man/minPenalty.Rd
smoothSurv/man/eval.Gspline.Rd
smoothSurv/man/c2a.Rd
smoothSurv/man/std.data.Rd
smoothSurv/man/derivative.expAD.Rd
smoothSurv/man/hazard.smoothSurvReg.Rd
smoothSurv/man/confint.smoothSurvReg.Rd
smoothSurv/man/dextreme.Rd
smoothSurv/man/MP.pseudoinv.Rd
smoothSurv/man/find.c.Rd
smoothSurv/man/smoothSurvReg.fit.Rd
smoothSurv/man/residuals.smoothSurvReg.Rd
smoothSurv/man/plot.smoothSurvReg.Rd
smoothSurv/man/derivative.cc3.Rd
smoothSurv/man/estimTdiff.Rd
smoothSurv/man/survfit.smoothSurvReg.Rd