API for sommer
Solving Mixed Model Equations in R

Global functions
.onAttach Source code
A.mat Man page Source code
AR1 Man page Source code
ARMA Man page Source code
CS Man page Source code
D.mat Man page Source code
E.mat Man page Source code
GWAS Man page Source code
H Source code
H.mat Man page Source code
MNR Man page Source code
ai_mme_sp Source code
amat Source code
anova.mmer Man page
anova.mmes Man page Source code
atm Man page Source code
atr Man page Source code
coef.mmer Man page
coef.mmes Man page
convertSparse Source code
corImputation Man page Source code
covm Man page Source code
csm Man page Source code
csr Man page Source code
currentDateTime Source code
dfToMatrix Man page Source code
dmat Source code
dsm Man page Source code
dsr Man page Source code
emat Source code
fitted.mmer Man page
fitted.mmes Man page
fixm Man page Source code
gwasForLoop Source code
hmat Source code
is.square.matrix Source code
isDiagonal_mat Source code
isDiagonal_spmat Source code
isIdentity_mat Source code
isIdentity_spmat Source code
ism Man page Source code
makeFull Source code
mat_to_vecCpp Source code
mat_to_vecCpp2 Source code
matrix.trace Source code
mmer Man page Source code
mmes Man page Source code
myformula Source code
nearPDcpp Source code
newton_di_sp Source code
plot.mmer Man page
plot.mmes Man page Source code
pmonitor Man page Source code
predict.mmer Man page
predict.mmes Man page
print.mmer Man page
print.mmes Man page
print.summary.mmer Man page
print.summary.mmes Man page
r2 Man page Source code
randef Man page
replace.values Source code
reshape_mmer Source code
residuals.mmer Man page
residuals.mmes Man page
scaleCpp Source code
scorecalc Source code
seqCpp Source code
simGECorMat Source code
sommer Man page
spl2Da Man page
spl2Db Man page
spl2Dc Man page Source code
spl2Dmats Man page Source code
subdata Source code
summary.mmer Man page
summary.mmes Man page
tpsmmbwrapper Man page
unsm Man page Source code
unsm2 Man page
usm Man page Source code
usr Man page Source code
varCols Source code
vcsExtract Source code
vec_to_cubeCpp Source code
vec_to_matCpp Source code
vpredict Man page Source code
vpredict.mmes Man page
vs Man page Source code
vsm Man page Source code
vsr Man page Source code
sommer documentation built on March 25, 2026, 9:08 a.m.