unsm: unstructured indication matrix

In sommer: Solving Mixed Model Equations in R

unstructured indication matrix

Description

unsm creates a square matrix with ones in the diagonals and 2's in the off-diagonals to quickly specify an unstructured constraint in the Gtc argument of the vsr function.

Usage

  unsm(x, reps=NULL)

Arguments

x	integer specifying the number of traits to be fitted for a given random effect.
reps	integer specifying the number of times the matrix should be repeated in a list format to provide easily the constraints in complex models that use the ds(), us() or cs() structures.

Value

$res

a matrix or a list of matrices with the constraints to be provided in the Gtc argument of the vsr function.

Author(s)

Giovanny Covarrubias-Pazaran

References

Covarrubias-Pazaran G (2016) Genome assisted prediction of quantitative traits using the R package sommer. PLoS ONE 11(6): doi:10.1371/journal.pone.0156744

See Also

The function vsr to know how to use unsm in the mmer solver.

Examples

unsm(3)
unsm(3,2)

sommer documentation built on Sept. 11, 2024, 6:22 p.m.