Files in sommer

Solving Mixed Model Equations in R

README.md R/RcppExports.R R/FUN_spatial_b.R R/FUN_spatial_c.R R/FUN_stats.R R/mmec.R R/predict_mmer.R R/GWAS.R R/FUN_relationships.R R/predict_mmec.R R/FUN_algorithms.R R/FUN_special.R R/FUN_markers.R R/FUN_utils.R R/FUN_spatial_a.R R/vpredict.R R/FUN_vsgrvsr.R R/FUN_emmeans.R R/mmer.R R/FUN_plotting.R R/FUN_vsc.R inst/doc/v4.sommer.gxe.Rmd inst/doc/v1.sommer.quick.start.Rmd inst/doc/v5.sommer.vs.lme4.Rmd inst/doc/v6.sommer.spatial.Rmd inst/doc/v4.sommer.gxe.R inst/doc/v3.sommer.qg.Rmd inst/doc/v6.sommer.spatial.pdf inst/doc/v3.sommer.qg.pdf inst/doc/v3.sommer.qg.R inst/doc/v2.sommer.changes.and.faqs.Rmd inst/doc/v2.sommer.changes.and.faqs.pdf inst/doc/v5.sommer.vs.lme4.R inst/doc/v4.sommer.gxe.pdf inst/doc/v5.sommer.vs.lme4.pdf inst/doc/v1.sommer.quick.start.pdf inst/doc/v1.sommer.quick.start.R inst/doc/v6.sommer.spatial.R inst/doc/v2.sommer.changes.and.faqs.R tests/testthat.R tests/mmec_examples.R tests/testthat/test-predict.R vignettes/v4.sommer.gxe.Rmd vignettes/v1.sommer.quick.start.Rmd vignettes/v5.sommer.vs.lme4.Rmd vignettes/v6.sommer.spatial.Rmd vignettes/v3.sommer.qg.Rmd vignettes/v2.sommer.changes.and.faqs.Rmd man/DT_example.Rd man/usr.Rd man/spl2Db.Rd man/atc.Rd man/propMissing.Rd man/unsm.Rd man/predict_mmer.Rd man/plot_mmer.Rd man/wald.Rd man/vsc.Rd man/r2.Rd man/map.plot.Rd man/H.mat.Rd man/predict_mmec.Rd man/DT_augment.Rd man/DT_gryphon.Rd man/rrc.Rd man/dfToMatrix.Rd man/mmer.Rd man/EM.Rd man/isc.Rd man/DT_technow.Rd man/manhattan.Rd man/sommer-package.Rd man/EMMA.Rd man/DT_legendre.Rd man/DT_halfdiallel.Rd man/summary_mmec.Rd man/dsc.Rd man/H.Rd man/fcm.Rd man/add.diallel.vars.Rd man/vs.Rd man/DT_fulldiallel.Rd man/DT_h2.Rd man/summary_mmer.Rd man/atr.Rd man/AR1mat.Rd man/atcg1234BackTransform.Rd man/plot.monitor.Rd man/corImputation.Rd man/DT_btdata.Rd man/transformConstraints.Rd man/CSmat.Rd man/logspace.Rd man/atcg1234.Rd man/DT_expdesigns.Rd man/DT_ige.Rd man/DT_cpdata.Rd man/bathy.colors.Rd man/coef_mmer.Rd man/build.HMM.Rd man/tpsmmbwrapper.Rd man/DT_polyploid.Rd man/DT_rice.Rd man/spl2Dmats.Rd man/D.mat.Rd man/leg.Rd man/DT_mohring.Rd man/impute.Rd man/spl2Da.Rd man/simGECorMat.Rd man/vpredict.Rd man/LD.decay.Rd man/randef.Rd man/DT_yatesoats.Rd man/csr.Rd man/covc.Rd man/gvsr.Rd man/plot_mmec.Rd man/spl2Dc.Rd man/vsr.Rd man/DT_sleepstudy.Rd man/usc.Rd man/bbasis.Rd man/AI.Rd man/overlay.Rd man/anova_mmer.Rd man/ARMAmat.Rd man/neMarker.Rd man/transp.Rd man/residuals_mmer.Rd man/stackTrait.Rd man/bivariateRun.Rd man/adiag1.Rd man/residuals_mmec.Rd man/redmm.Rd man/tps.Rd man/coef_mmec.Rd man/fixm.Rd man/anova_mmec.Rd man/DT_cornhybrids.Rd man/GWAS.Rd man/E.mat.Rd man/DT_wheat.Rd man/fitted_mmec.Rd man/dsr.Rd man/jet.colors.Rd man/fitted_mmer.Rd man/csc.Rd man/mmec.Rd man/A.mat.Rd man/list2usmat.Rd