fitted_mmer: fitted form a LMM fitted with mmer

In sommer: Solving Mixed Model Equations in R

fitted form a LMM fitted with mmer

Description

fitted method for class "mmer".

Usage

## S3 method for class 'mmer'
fitted(object, ...)

Arguments

object	an object of class "mmer"
...	Further arguments to be passed to the mmer function

Value

vector of fitted values of the form y.hat = Xb + Zu including all terms of the model.

Author(s)

Giovanny Covarrubias

See Also

fitted, mmer

Examples

# data(DT_cpdata)
# DT <- DT_cpdata
# GT <- GT_cpdata
# MP <- MP_cpdata
# #### create the variance-covariance matrix
# A <- A.mat(GT) # additive relationship matrix
# #### look at the data and fit the model
# head(DT)
# mix1 <- mmer(Yield~1,
#               random=~vsr(id,Gu=A)
#                       + Rowf + Colf + spl2Da(Row,Col),
#               rcov=~units,
#               data=DT)
# 
# ff=fitted(mix1)
# 
# colfunc <- colorRampPalette(c("steelblue4","springgreen","yellow"))
# lattice::wireframe(`u:Row.fitted`~Row*Col, data=ff$dataWithFitted,  
#           aspect=c(61/87,0.4), drape=TRUE,# col.regions = colfunc,
#           light.source=c(10,0,10))
# lattice::levelplot(`u:Row.fitted`~Row*Col, data=ff$dataWithFitted, col.regions = colfunc)

sommer documentation built on Sept. 11, 2024, 6:22 p.m.