API for spgs
Statistical Patterns in Genomic Sequences

Global functions
FHatCovariances Source code
FillToSquare Source code
GibbsCovariances Source code
ISPX2mat Source code
ISPX2vec Source code
ag.test Man page Source code
agct.test Man page Source code
agctTestPValue Source code
agctTestPValueFromMonteCarlo Source code
agctTestPValueLowerBound Source code
agctTestPValueLowerBoundTight Source code
agctTestPValueUpperBound Source code
array2vector Man page
charfilter Source code
chargaff.gibbs.test Man page Source code
chargaff0.test Man page Source code
chargaff0testPValue Source code
chargaff0testPValueFromMonteCarlo Source code
chargaff0testPValueLowerBound Source code
chargaff0testPValueLowerBoundTight Source code
chargaff0testPValueUpperBound Source code
chargaff0testPValueUpperBoundTight Source code
chargaff1.test Man page Source code
chargaff1testPValueFromMonteCarlo Source code
chargaff1testPValueFromTable Source code
chargaff1testPValueFromUpperBound Source code
chargaff2.test Man page Source code
chargaff2testPValueFromMonteCarlo Source code
chargaff2testPValueFromMonteCarlo2 Source code
chargaff2testPValueFromTable Source code
chargaff2testPValueFromUpperBound Source code
chisq.unif.test Man page Source code
complement Man page Source code
complement.SeqFastadna Man page Source code
complement.default Man page Source code
complement.list Man page Source code
cyl2lag2.counts Source code
cylinder.counts Man page Source code
diffsign.test Man page Source code
diid.disturbance Man page Source code
diid.test Man page Source code
disambiguate Man page Source code
disambiguate.SeqFastadna Man page Source code
disambiguate.default Man page Source code
disambiguate.list Man page Source code
estimateMarkovChain Man page Source code
ks.unif.test Man page Source code
lb.test Man page Source code
markov.disturbance Man page Source code
markov.test Man page Source code
nanoarchaeum Man page
oligoCorr Man page Source code
oligoProfile Man page Source code
onUnload Source code
pagcttest Source code
pagtestoninterval Source code
pagtestonsimplex Source code
pair.counts Man page Source code
pieris Man page
plot.OligoProfile Man page Source code
print.FiniteStateMarkovChain Source code
print.OligoProfile Man page Source code
print.htest.ext Source code
print.multiplehtests Source code
quadruple.counts Man page Source code
rank.test Man page Source code
rcspr2mat Man page Source code
reverseComplement Man page Source code
reverseComplement.SeqFastadna Man page Source code
reverseComplement.default Man page Source code
reverseComplement.list Man page Source code
rstochmat Man page Source code
rstochvec Man page Source code
simulateMarkovChain Man page Source code
spgs Man page
spgs-package Man page
statdist Source code
strreverse Source code
table2vector Man page
triple.counts Man page Source code
turningpoint.test Man page Source code
spgs documentation built on May 17, 2018, 1:04 a.m.