agct.test | Test of Purine-Pyrimidine Parity Based on Euclidean distance |
ag.test | Test of Purine-Pyrimidine Parity Based on Purine Count |
array2vector | Convert Arrays and Tables to Vectors with Named Elements |
chargaff0.test | Vector Test of Chargaff's Second Parity Rule (CSPR) for... |
chargaff1.test | Matrix Test of CSPR for Mononucleotides |
chargaff2.test | Matrix Test of CSPR for Dinucleotides |
chargaff.gibbs.test | Test of CSPR for Dinucleotides Under Gibbs Distribution |
chisq.unif.test | Test of Uniformity Based on Pearsons's Chi-Squared test |
complement | Complement of a DNA/RNA Sequence |
cylinder.counts | Count Cylinders (Fixed-Offset Patterns) in Character Vectors |
diffsign.test | the Differents-Sign Test of Statistical Independence |
diid.disturbance | Construct feasible Random Noise Generating a Bernoulli... |
diid.test | A Test for a Bernoulli Scheme (IID Sequence) |
disambiguate | Disambiguate a Nucleic Sequence |
estimateMarkovChain | Fit a first-Order Markov Chain to a Sequence of Finite... |
ks.unif.test | Using 'ks.test' to test for Uniformity on the Unit Interval |
lb.test | The Ljung-Box Test for Uncorrelated Data |
markov.disturbance | Construct feasible Random Noise Generating a First-Order... |
markov.test | A Test for First-Order Markovianness |
nanoarchaeum | DNA sequence for the Nanoarchaeum equitans Kin4-M Chromosome |
oligoProfile | Oligo Profiles and Oligo Profile Correlation Plots of... |
pair.counts | Count Pairs in Character Vectors |
pieris | DNA sequence for the Pieris Rapae Granulovirus Genome |
quadruple.counts | Count Quadruplets in Character Vectors |
rank.test | The Rank Test of Statistical Independence |
rcspr2mat | Random Stochastic Matrices Complying with Chargaff's Second... |
reverseComplement | Reverse Complement of a DNA/RNA Sequence |
rstochmat | Random Generation of Stochastic Matrices |
rstochvec | Random Generation of Stochastic (Probability) Vectors |
simulateMarkovChain | Simulate a first-Order Markov Chain |
spgs-package | Statistical Patterns in Genomic Sequences |
triple.counts | Count Triplets in Character Vectors |
turningpoint.test | The Turning Point Test of Statistical Independence |
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