Files in spgs
Statistical Patterns in Genomic Sequences
configure
MD5
NAMESPACE
configure.ac
DESCRIPTION
cleanup
R/sysdata.rda
R/diid.test.R
R/reverseComplement.R
R/markov.test.R
R/ISPHelpers.R
R/print.R
R/agct.test.R
R/complement.R
R/chargaff0.test.R
R/auxtests.R
R/chargaff1.test.R
R/oligoCorr.R
R/ag.test.R
R/counting.R
R/FHatCovariances.R
R/chargaff.gibbs.test.R
R/profile.R
R/randmat.R
R/MarkovChains.R
R/GibbsCovariances.R
R/chargaff2.test.R
R/hooks.R
R/disambiguate.R
src/Makevars.win
src/spgs.c
src/spgs.h
src/uint64.h
src/Makevars.in
src/spgs-win.def
inst/NEWS.Rd
inst/CITATION
build/partial.rdb
tests/profileTest.Rout.savefile
tests/countingTest.Rout.savefile
tests/profileTest.R
tests/countingTest.R
data/datalist
data/nanoarchaeum.rda
data/pieris.rda
man/estimateMarkovChain.Rd
man/rstochvec.Rd
man/rank.test.Rd
man/ag.test.Rd
man/nanoarchaeum.Rd
man/cylinder.counts.Rd
man/diid.test.Rd
man/oligoProfile.Rd
man/rstochmat.Rd
man/diffsign.test.Rd
man/disambiguate.Rd
man/pieris.Rd
man/quadruple.counts.Rd
man/chargaff2.test.Rd
man/agct.test.Rd
man/reverseComplement.Rd
man/chargaff.gibbs.test.Rd
man/pair.counts.Rd
man/diid.disturbance.Rd
man/triple.counts.Rd
man/markov.disturbance.Rd
man/chargaff0.test.Rd
man/markov.test.Rd
man/simulateMarkovChain.Rd
man/ks.unif.test.Rd
man/complement.Rd
man/turningpoint.test.Rd
man/chargaff1.test.Rd
man/lb.test.Rd
man/array2vector.Rd
man/chisq.unif.test.Rd
man/spgs-package.Rd
man/rcspr2mat.Rd
