manual_tour: Produce the series of projection bases to rotate a variable...

In spinifex: Manual Tours, Manual Control of Dynamic Projections of Numeric Multivariate Data

Produce the series of projection bases to rotate a variable into and out of a projection.

Description

Typically called by array2af(). An array of projections, the radial tour of the manip_var, which is rotated from phi's starting position to phi_max, to phi_min, and back to the start position.

Usage

manual_tour(
  basis,
  manip_var,
  theta = NULL,
  phi_min = 0,
  phi_max = pi/2,
  data = NULL
)

Arguments

basis	A (p, d) orthonormal numeric matrix. The linear combination the original variables contribute to projection space. Defaults to NULL, generating a random basis.
manip_var	Integer column number or string exact column name of the. variable to manipulate. Required, no default.
theta	Angle in radians of "in-plane" rotation, on the xy plane of the reference frame. Defaults to theta of the basis for a radial tour.
phi_min	Minimum value phi should move to. Phi is angle in radians of the "out-of-plane" rotation, the z-axis of the reference frame. Required, defaults to 0.
phi_max	Maximum value phi should move to. Phi is angle in radians of the "out-of-plane" rotation, the z-axis of the reference frame. Required, defaults to pi/2.
data	Optionally attach data to the basis path.

Value

A (p, d, 4) history_array of the radial tour. The bases set for phi_start, phi_min, phi_max, and back to phi_start.

See Also

Other manual tour adjacent functions: create_manip_space(), interpolate_manual_tour(), manip_var_of(), rotate_manip_space()

Examples

library(spinifex)
dat  <- scale_sd(wine[, 2:6])
clas <- wine$Type
bas  <- basis_pca(dat)
mv   <- manip_var_of(bas)
manual_tour(basis = bas, manip_var = mv)

## All arguments
manual_tour(basis = bas, manip_var = mv,
            theta = pi / 2, phi_min = pi / 16, phi_max = pi)

## Animating with ggtour() & proto_* (d = 2 case)
mt <- manual_tour(basis = bas, manip_var = mv)
ggt <- ggtour(mt, dat, angle = .2) +
  proto_origin() +
  proto_point(list(color = clas, shape = clas)) +
  proto_basis()

animate_plotly(ggt)


## d = 1 case
## basis could be 1- or 2D; protos_* only use 1st column
mv  <- manip_var_of(bas)
mt  <- manual_tour(basis = bas, manip_var = mv)
ggt <- ggtour(mt, dat, angle = .3) +
  proto_density(aes_args = list(color = clas, fill = clas)) +
  proto_basis1d() +
  proto_origin1d()

animate_plotly(ggt)


## Bring your own basis
bas <- matrix(rnorm(2 * ncol(dat)), ncol = 2)
bas <- orthonormalise(bas) ## manual_tour warns if basis isn't orthonormal
mt  <- manual_tour(basis = bas, manip_var = 1)
ggt <- ggtour(mt, dat, angle = .2) +
  proto_default(aes_args = list(color = clas, shape = clas))

animate_plotly(ggt)

spinifex documentation built on May 29, 2024, 1:23 a.m.