spm12r: Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'

Installs 'SPM12' to the R library directory and has associated functions for 'fMRI' and general imaging utilities, called through 'MATLAB'.

Author
John Muschelli
Date of publication
2016-09-28 17:10:56
Maintainer
John Muschelli <muschellij2@gmail.com>
License
GPL-2 | file LICENCE
Version
2.0

View on CRAN

Man pages

acpc_reorient
AC/PC Reorientation
bwconncomp
Label Connected Clusters of Certain Size
filename_check
Perform filename checks for SPM
group_xyz
Center of Gravity for Multiple Areas
install_spm12
Install SPM12 file into directory
ntime_points
Get number of time points from a file
run_spm12_script
Wrapper for running 'spm12_script'
spm12_coregister
SPM12 Coregister (Estimate and Reslice)
spm12_normalize
SPM12 Normalize (Estimate and Write)
spm12_normalize_est
SPM12 Normalize (Estimate)
spm12_normalize_write
SPM12 Normalize (Write)
spm12_realign
SPM12 Realign (Estimate and Reslice)
spm12_realign_est
SPM12 Realign (Estimate)
spm12_script
Find SPM12 Script
spm12_segment
SPM12 Segment
spm12_slice_timing
SPM12 Slice Timing Correction
spm12_smooth
SPM12 Smooth
spm_bwlabel
SPM BWLabel Clusters of Certain Size
spm_dir
Get SPM12 Directory
spm_probs_to_seg
SPM Probability to Hard Segmentation

Files in this package

spm12r
spm12r/inst
spm12r/inst/scripts
spm12r/inst/scripts/First_Level.m
spm12r/inst/scripts/Segment_job.m
spm12r/inst/scripts/Coregister_job.m
spm12r/inst/scripts/Realign_Estimate_job.m
spm12r/inst/scripts/Normalize_Estimate_and_Write_job.m
spm12r/inst/scripts/Normalize_Write_job.m
spm12r/inst/scripts/Slice_Timing_job.m
spm12r/inst/scripts/Smooth_job.m
spm12r/inst/scripts/Coregistration_job.m
spm12r/inst/scripts/Realign_job.m
spm12r/inst/scripts/First_Level_job.m
spm12r/inst/scripts/Normalize_Estimate_job.m
spm12r/inst/scripts/Executable.m
spm12r/NAMESPACE
spm12r/R
spm12r/R/spm_dir.R
spm12r/R/spm12_script.R
spm12r/R/spm12_slice_timing.R
spm12r/R/spm_probs_to_seg.R
spm12r/R/spm_bwlabel.R
spm12r/R/spm12_normalize_est.R
spm12r/R/ntime_points.R
spm12r/R/spm12_coregister.R
spm12r/R/spm12_smooth.R
spm12r/R/bwconncomp.R
spm12r/R/run_spm12_script.R
spm12r/R/install_spm12.R
spm12r/R/spm12_realign_est.R
spm12r/R/spm12_segment.R
spm12r/R/spm12_normalize.R
spm12r/R/spm12_normalize_write.R
spm12r/R/spm12_realign.R
spm12r/R/acpc_reorient.R
spm12r/R/group_xyz.R
spm12r/R/check_filename.R
spm12r/MD5
spm12r/DESCRIPTION
spm12r/LICENCE
spm12r/man
spm12r/man/run_spm12_script.Rd
spm12r/man/spm_dir.Rd
spm12r/man/spm12_coregister.Rd
spm12r/man/spm_bwlabel.Rd
spm12r/man/spm_probs_to_seg.Rd
spm12r/man/spm12_realign_est.Rd
spm12r/man/spm12_script.Rd
spm12r/man/acpc_reorient.Rd
spm12r/man/filename_check.Rd
spm12r/man/spm12_slice_timing.Rd
spm12r/man/install_spm12.Rd
spm12r/man/spm12_normalize_write.Rd
spm12r/man/spm12_normalize.Rd
spm12r/man/spm12_realign.Rd
spm12r/man/spm12_segment.Rd
spm12r/man/group_xyz.Rd
spm12r/man/bwconncomp.Rd
spm12r/man/spm12_smooth.Rd
spm12r/man/ntime_points.Rd
spm12r/man/spm12_normalize_est.Rd